Pt_spiderBASE2

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Expression profiles of early embryos

Expression profile by HTseq_count data
Gene IDindividual IDst1st2st3st4st5est5lst6st7st8st10
aug3.g1 NN-741 0 0 0 0 0 0 0 0 0 0
aug3.g1 T1-404 0 0 0 0 0 0 0 0 0 0
aug3.g10 NN-741 1 0 0 1 4 2 3 1 1 5
aug3.g10 T1-404 2 0 2 5 4 4 1 2 0 5
aug3.g100 NN-741 0 0 0 0 1 1 0 0 0 0
aug3.g100 T1-404 0 0 0 0 0 0 0 0 0 0
aug3.g1000 NN-741 76 113 114 199 247 268 229 323 273 272
aug3.g1000 T1-404 19 85 161 352 429 579 531 554 434 312
aug3.g10000 NN-741 28 43 26 17 18 27 18 42 68 64
aug3.g10000 T1-404 33 48 51 16 13 30 22 37 66 35

Please enter aug3 Gene ID (ex. aug3.g10034)

Field: find:

Stage Description
StageDescription
stage116 nucleus (about 9hr AEL)
stage2After 256 nucleus (about 15hr AEL)
stage3Forming the germ disc (about 20-21hr AEL)
stage4The germ disc with white spot at the center (about 25-26hr AEL)
stage5 earlyThe cumulus appeared at the center of the germ disc (about 31-32hr AEL)
stage5 lateThe cumulus moved to the rim of the germ disc (about 36-37hr AEL)
stage6The cumulus disappeared (about 42-43hr AEL)
stage7Segmentation (about 50hr AEL)
stage8The germ band is formed (about 60hr AEL)
stage10The limb segments appeared (about 78hr AEL)

Reference
1. Yasuko Akiyama-Oda and Hiroki Oda (2003)  Development, 130, 1735-1747



Total count (reads)
Individual ID st1st2st3st4st5est5lst6st7st8st10
T1-404 1393253310134403101223001159600812046366 1325908116536827170190091620731713199110
NN-741 113553441125179091608021050875410761796 938454714647502139087791639727115282635

The data was collected and analyzed by Sawa Iwasaki (BRH).

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Last updated, 2015.12.16