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Table
ID
Reference/
Journal
File name (data table)/
Table title
DisplayDownloadSample/
Stage
Experiment/
Method
GeneKeys
T0001 Akiyama-Oda and Oda (2020)
Sci Adv
TableS1_Hh_signaling_genes_hyperlinkadded.xlsx
Table S1. Parasteatoda tepidariorum counterparts of Hedgehog signaling genes
Display Download Hh signaling pathway components
na
homolog search
Blast
hedgehog|hh/patched|ptc/smoothened|smo
T0002 Akiyama-Oda and Oda (2020)
Sci Adv
TableS2_hhptc_st5selected_hyperlinkadded.xlsx
Table S2. Ninety-eight genes identified in Pt-hh and Pt-ptc pRNAi and RNA-seq experiments at late stage 5 and differentially expressed gene analysis
Display Download hh and ptc pRNAi embryos
st_5
Identification of DEGs
pRNAi_RNAseq
hedgehog|hh/patched|ptc
T0003 Akiyama-Oda and Oda (2020)
Sci Adv
TableS3_msx_st6selected_hyperlinkadded.xlsx
Table S3. Forty genes selected from DEGs identified in Pt-msx1 pRNAi and RNA-seq experiments at stage 6
Display Download msx1|msh pRNAi embryos
st_6
Identification of DEGs
pRNAi_RNAseq
msx1|msh
T0004 Akiyama-Oda and Oda (2020)
Sci Adv
TableS4_primers&clones.xlsx
Table S4. Primers and clones
Display Download primers_clones
na
na
PCR_EST_RACE
hedgehog
T0005 Akiyama-Oda and Oda (2020)
Sci Adv
Data_fileS1_RNAseq.xlsx
Data file S1. Summary of RNA-seq Mapping and HTseq-count
Display Download gfp hh ptc and msx1 pRNAi embryos
st_3_5_6
sequence reads
pRNAi_RNAseq
gfp/hedgehog|hh/patched|ptc/msx1|msh
T0006 Akiyama-Oda and Oda (2020)
Sci Adv
Data_fileS2_count.xlsx
Data file S2. Result of HTseq-count per gene
Display Download gfp hh ptc and msx1 pRNAi embryos
st_3_5_6
mapping read counts
pRNAi_RNAseq
gfp/hedgehog|hh/patched|ptc/msx1|msh
T0007 Akiyama-Oda and Oda (2020)
Sci Adv
Data_fileS3_deg_Hh_hyperlinkadded.xlsx
Data file S3.1. Differentially expressed genes identified in Pt-hh pRNAi and RNA-seq at early stage 3
Display Download hh pRNAi embryos
st_3
Identification of DEGs
pRNAi_RNAseq
hedgehog|hh
T0008 Akiyama-Oda and Oda (2020)
Sci Adv
Data_fileS3_deg_Hh_hyperlinkadded.xlsx
Data file S3.2. Differentially expressed genes identified in Pt-hh pRNAi and RNA-seq at late stage 5
Display Download hh pRNAi embryos
st_5
Identification of DEGs
pRNAi_RNAseq
hedgehog|hh
T0009 Akiyama-Oda and Oda (2020)
Sci Adv
Data_fileS4_deg_Ptc_hyperlinkadded.xlsx
Data file S4.1. Differentially expressed genes identified in Pt-ptc pRNAi and RNA-seq at early stage 3
Display Download ptc pRNAi embryos
st_3
Identification of DEGs
pRNAi_RNAseq
patched|ptc
T0010 Akiyama-Oda and Oda (2020)
Sci Adv
Data_fileS4_deg_Ptc_hyperlinkadded.xlsx
Data file S4.2. Differentially expressed genes identified in Pt-ptc pRNAi and RNA-seq at late stage 5
Display Download ptc pRNAi embryos
st_5
Identification of DEGs
pRNAi_RNAseq
patched|ptc
T0011 Akiyama-Oda and Oda (2020)
Sci Adv
Data_fileS6_deg_Msx_hyperlinkadded.xlsx
Data file S6.1. Differentially expressed genes identified in Pt-msx1 pRNAi and RNA-seq at late stage 5
Display Download msx1_msh pRNAi embryos
st_3
Identification of DEGs
pRNAi_RNAseq
msx1|msh
T0012 Akiyama-Oda and Oda (2020)
Sci Adv
Data_fileS6_deg_Msx_hyperlinkadded.xlsx
Data file S6.2. Differentially expressed genes identified in Pt-msx1 pRNAi and RNA-seq at stage 6
Display Download msx1_msh pRNAi embryos
st_5
Identification of DEGs
pRNAi_RNAseq
msx1|msh
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Last updated by hiroki oda, 2020.9.10