Table S15. List of differential ATAC-seq peaks between Pt-hh
pRNAi and wild-type embryos at stage 3 (FDR < 0.05). |
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sort |
peak ID |
scaffold |
start |
end |
width |
logFC |
logCPM |
F |
PValue |
FDR |
up/down |
significance |
peak_center |
nearest_gene |
gene_start |
gene_end |
augID |
product |
note |
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1 |
5012 |
NW_018373023.1 |
904768 |
905200 |
433 |
10.0297445 |
0.93290106 |
162.300832 |
2.25E-08 |
0.00038409 |
up |
significant |
904984 |
LOC107456693 |
909041 |
909529 |
aug3.g8767 |
cuticle protein 10.9-like |
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2 |
10199 |
NW_018377500.1 |
3271076 |
3271331 |
256 |
3.51371023 |
0.92673728 |
80.4505501 |
5.89E-07 |
0.0050186 |
up |
significant |
3271216 |
LOC107449698 |
3117453 |
3257597 |
aug3.g20884 |
diuretic hormone class 2-like |
This peak was considered to be non-specific
because essentially the same peak was listed from the comparison between the
fuchi pRNAi and wild-type samples. |
3 |
1228 |
NW_018369356.1 |
171217 |
171557 |
341 |
2.88033004 |
1.24943756 |
56.4909323 |
4.19E-06 |
0.02382378 |
up |
significant |
171387 |
LOC107441946 |
182344 |
183105 |
aug3.g16274 |
jerky protein homolog-like |
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