Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Dataset ID: sn1_st5l | GeneID(LOC) list: cluster_10


word count=91
Gene/Transcript Records
query No.NCBI geneID (-> UMAP)stage 5lstage 7stage 5lstage 7Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
1 LOC107447499 Ptep1.0/2.0 NW_024969702.1 1206168 1373996 + uncharacterized LOC107447499 LOC107447499 0
2 LOC107450670 Ptep1.0/2.0 NW_024969605.1 1868024 1962441 - uncharacterized LOC107450670 aug3.g15599 LOC107450670 9e-139
3 LOC107452883 Ptep1.0/2.0 NW_024969866.1 208885 222519 + achaete-scute homolog 1 aug3.g5047 LOC107452883 0
4 LOC107453167 Ptep1.0/2.0 NW_024969729.1 786038 954724 - zinc finger protein 37 aug3.g9318 LOC107453167 0
5 LOC107451660 Ptep1.0/2.0 NW_024970846.1 24518 42153 - vitamin K-dependent protein C aug3.g4198 LOC107451660 0
6 LOC107455285 Ptep1.0/2.0 NW_024970111.1 152980 173757 + abhydrolase domain-containing protein C22H12.03 aug3.g6972 LOC107455285 0
7 LOC107442497 Ptep1.0/2.0 NW_024970178.1 570255 583598 - uncharacterized LOC107442497 aug3.g27670,aug3.g20943 LOC107442497 0
8 LOC107445228 Ptep1.0/2.0 NW_024970111.1 88004 113931 - protein gooseberry aug3.g18397 LOC107445228 0
9 LOC107456506 Ptep1.0/2.0 NW_024970253.1 263882 337503 + uncharacterized LOC107456506 aug3.g8629 LOC107456506 0
10 LOC107457039 Ptep1.0/2.0 NW_024969702.1 2286399 2311370 - homeobox protein Hox-A9b aug3.g25355 LOC107457039 0
11 LOC107444253 Ptep1.0/2.0 NW_024970103.1 404502 414936 - transcription factor HES-1-A aug3.g17723 LOC107444253 0
12 LOC107451685 Ptep1.0/2.0 NW_024969853.1 177887 310356 - roundabout homolog 3 aug3.g10604 LOC107451685 0
13 LOC107444955 Ptep1.0/2.0 NW_024969713.1 1085101 1212180 - uncharacterized LOC107444955 aug3.g887,aug3.g886 LOC107444955 0
14 LOC107453612 Ptep1.0/2.0 NW_024969989.1 108237 160230 + protein Wnt-8b-like aug3.g5617 LOC107453612 0
15 LOC107444844 Ptep1.0/2.0 NW_024969601.1 520078 548512 - protein giant-lens aug3.g839 LOC107444844 0
16 LOC107447180 Ptep1.0/2.0 NW_024969738.1 599279 704963 + protein Wnt-5b-like aug3.g1632 LOC107447180 0
17 LOC107438301 Ptep1.0/2.0 NW_024970082.1 78025 165064 + zinc finger protein 236 aug3.g12961 LOC107438301 0
18 LOC107452006 Ptep1.0/2.0 NW_024969863.1 833764 911467 - transcription factor AP-2-beta aug3.g23531 LOC107452006 0
19 LOC107451332 Ptep1.0/2.0 NW_024970574.1 30477 76012 + uncharacterized LOC107451332 aug3.g3963,aug3.g15729 LOC110283199,LOC107451332 0
20 LOC107443647 Ptep1.0/2.0 NW_024969633.1 2459596 2538273 + plexin-B aug3.g17369 LOC107443647 0
21 LOC107450899 Ptep1.0/2.0 NW_024969598.1 1524043 1618053 + sal-like protein 1 aug3.g3675 LOC107450899 0
22 LOC107448951 Ptep1.0/2.0 NW_024969736.1 1621274 1652709 - BTB/POZ domain-containing protein kctd15-like aug3.g2480 LOC107448951 0
23 LOC107454354 Ptep1.0/2.0 NW_024970850.1 258319 323944 + semaphorin-5A aug3.g6222 LOC107454354 0
24 LOC107456521 Ptep1.0/2.0 NW_024969618.1 671428 785428 - ephrin-B2a aug3.g25262 LOC107456521 0
25 LOC107438758 Ptep1.0/2.0 NW_024970060.1 453865 533783 - epidermal growth factor receptor aug3.g13345,aug3.g13344 LOC107438758 0
26 LOC107450465 Ptep1.0/2.0 NW_024969917.1 59508 180280 + recombining binding protein suppressor of hairless aug3.g15584 LOC107450465 0
27 LOC107441660 Ptep1.0/2.0 NW_024970650.1 7267 100342 - unconventional myosin-Ie aug3.g9845,aug3.g9846,aug3.g22123 LOC107441660 0
28 LOC107446080 Ptep1.0/2.0 NW_024969727.1 155592 168820 - cyclin-dependent kinase 20 aug3.g1238 LOC107446080 0
29 LOC107441406 Ptep1.0/2.0 NW_024971166.1 58212 95218 + uncharacterized LOC107441406 aug3.g27275 LOC107441406 0
30 LOC107441688 Ptep1.0/2.0 NW_024969976.1 310836 354704 - recombining binding protein suppressor of hairless aug3.g27389 LOC107441688 0
31 LOC107447307 Ptep1.0/2.0 NW_024971214.1 14262 18868 + uncharacterized LOC107447307 aug3.g21167 LOC107447307 0
32 LOC107456960 Ptep1.0/2.0 NW_024969952.1 625314 668845 + suppressor of cytokine signaling 2 aug3.g25340,aug3.g25341 LOC107456960 0
33 LOC107438015 Ptep1.0/2.0 NW_024970324.1 150825 183689 - growth arrest-specific protein 1 aug3.g9575 LOC107438015 0
34 LOC107439672 Ptep1.0/2.0 NW_024972112.1 142331 148829 - serine/threonine-protein kinase pim-3 aug3.g13957 LOC107439672 0
35 LOC107442485 Ptep1.0/2.0 NW_024970178.1 423546 524727 - partitioning defective 3 homolog aug3.g27669 LOC107442485 0
36 LOC107446115 Ptep1.0/2.0 NW_024970281.1 10697 82354 - extracellular sulfatase Sulf-1 aug3.g18939 LOC107446115 0
37 LOC107443364 Ptep1.0/2.0 NW_024970254.1 5297 27059 + uncharacterized LOC107443364 aug3.g17172 LOC107443364 0
38 LOC107447678 Ptep1.0/2.0 NW_024969609.1 2445589 2461432 + homeobox protein MSH-D aug3.g15189 LOC107447678 0
39 LOC107446561 Ptep1.0/2.0 NW_024970340.1 276515 329441 + small conductance calcium-activated potassium channel protein aug3.g1380,aug3.g23104 LOC107446561 0
40 LOC107453822 Ptep1.0/2.0 NW_024969820.1 608019 641067 + midnolin-A aug3.g5791 LOC107453822 0
41 LOC107454821 Ptep1.0/2.0 NW_024970050.1 685673 711049 + uncharacterized LOC107454821 aug3.g23640 LOC107454821 2e-50
42 LOC107451222 Ptep1.0/2.0 NW_024971132.1 93378 133670 - uncharacterized LOC107451222 aug3.g21431 LOC107451222 2e-173
43 LOC107438011 Ptep1.0/2.0 NW_024969744.1 383869 552126 + neurogenic locus protein delta aug3.g12734 LOC107438011 0
44 LOC107451464 Ptep1.0/2.0 NW_024970103.1 528261 530087 + transcription factor HES-4-A-like aug3.g4026 LOC107451464 0
45 LOC107451426 Ptep1.0/2.0 NW_024969865.1 247787 313818 + uncharacterized LOC107451426 aug3.g15724 LOC107451426 0
46 LOC107452888 Ptep1.0/2.0 NW_024969945.1 216162 280847 - uncharacterized LOC107452888 aug3.g5060 LOC107452888 0
47 LOC107448091 Ptep1.0/2.0 NW_024970074.1 147787 268066 - rab11 family-interacting protein 4B aug3.g2082,aug3.g22713 LOC107447465,LOC107448091 0
48 LOC110283330 Ptep1.0/2.0 NW_024972665.1 10652 15547 + uncharacterized LOC110283330 aug3.g21167,aug3.g11138 LOC110283330 0
49 LOC107440619 Ptep1.0/2.0 NW_024970318.1 289854 377527 - ETS domain-containing protein Elk-1 aug3.g9766 LOC107440619 0
50 LOC107447504 Ptep1.0/2.0 NW_024969702.1 638301 654680 - homeobox protein Hox-B5b aug3.g1787,aug3.g1786 LOC107447504 0
51 LOC107451223 Ptep1.0/2.0 NW_024971132.1 134491 146793 + uncharacterized protein DDB_G0271670 aug3.g21432 LOC107451223 0
52 LOC107447651 Ptep1.0/2.0 NW_024970442.1 18729 40945 - uncharacterized LOC107447651 aug3.g1855,aug3.g1854 LOC107447651 0
53 LOC107454926 Ptep1.0/2.0 NW_024970708.1 205351 232208 + bcl-2-like protein 1 aug3.g23010,aug3.g6695,aug3.g6694 LOC107454925,LOC107454926 0
54 LOC107450335 Ptep1.0/2.0 NW_024969819.1 2114835 2277923 + zinc finger protein basonuclin-2 aug3.g3273 LOC107450335 0
55 LOC107448674 Ptep1.0/2.0 NW_024969751.1 922301 975454 + uncharacterized LOC107448674 aug3.g20402 LOC107448674 0
56 LOC107447970 Ptep1.0/2.0 NW_024969607.1 782992 812236 + aurora kinase C aug3.g15230 LOC107447970 0
57 LOC107453601 Ptep1.0/2.0 NW_024969989.1 171471 222480 + protein transport protein Sec24A aug3.g5615 LOC107453601 0
58 LOC107448985 Ptep1.0/2.0 NW_024970718.1 139106 309402 + mucin-12 aug3.g2518 LOC107448985 0
59 LOC107451864 Ptep1.0/2.0 NW_024971353.1 13497 61893 + gonadotropin-releasing hormone II receptor aug3.g4360 LOC107451864 0
60 LOC107456664 Ptep1.0/2.0 NW_024970326.1 218582 224336 - uncharacterized LOC107456664 aug3.g8740 LOC107456664 0
61 LOC107452768 Ptep1.0/2.0 NW_024969678.1 2347527 2490052 - cytokine receptor aug3.g4975 LOC107452768 0
62 LOC107448055 Ptep1.0/2.0 NW_024969602.1 294505 421644 - pro-epidermal growth factor aug3.g2047 LOC107448055 0
63 LOC107437786 Ptep1.0/2.0 NW_024969751.1 718336 788386 + uncharacterized LOC107437786 aug3.g12585 LOC107437786 0
64 LOC107439278 Ptep1.0/2.0 NW_024969646.1 3785604 3897855 - uncharacterized LOC107439278 aug3.g13670 LOC107439278 0
65 LOC107455560 Ptep1.0/2.0 NW_024969728.1 1122789 1147381 + cell division control protein 42 homolog aug3.g7849,aug3.g7850 LOC107455560 0
66 LOC107443783 Ptep1.0/2.0 NW_024969706.1 2038945 2314643 - plexin-A2 aug3.g428 LOC107443783 0
67 LOC107456634 Ptep1.0/2.0 NW_024969616.1 359408 401655 + RNA polymerase-associated protein CTR9 homolog aug3.g8712,aug3.g23794 LOC107456634 0
68 LOC107453362 Ptep1.0/2.0 NW_024969770.1 1350258 1415411 - uncharacterized LOC107453362 aug3.g23776 LOC107453362 0
69 LOC107452613 Ptep1.0/2.0 NW_024969646.1 42031 147767 + lysine-specific demethylase 3B aug3.g292 LOC107452613 0
70 LOC107447162 Ptep1.0/2.0 NW_024970416.1 126814 139358 - protein C-ets-1 aug3.g19580 LOC107447162 0
71 LOC107448298 Ptep1.0/2.0 NW_024971929.1 3124 49225 + transcriptional enhancer factor TEF-1 aug3.g15304 LOC107448298 0
72 LOC107451579 Ptep1.0/2.0 NW_024970106.1 1155904 1253584 + E3 ubiquitin-protein ligase Rnf220 aug3.g4121 LOC107451579 0
73 LOC110281924 Ptep1.0/2.0 NW_024969777.1 469843 612682 + triadin aug3.g6466,aug3.g6465 LOC110281924 0
74 LOC107442050 Ptep1.0/2.0 NW_024970088.1 426101 534623 - laminin subunit alpha-1 aug3.g16317 LOC107442050 0
75 LOC107438220 Ptep1.0/2.0 NW_024969817.1 766387 824501 - MICAL-like protein 1 aug3.g12909 LOC107438220 0
76 LOC107446595 Ptep1.0/2.0 NW_024971095.1 21390 66611 + uncharacterized LOC107446595 aug3.g1396 LOC107446595 0
77 LOC107441179 Ptep1.0/2.0 NW_024969792.1 550824 620514 + protein grainyhead aug3.g27212,aug3.g23194,aug3.g10582 LOC107441179,LOC107451351 0
78 LOC107457070 Ptep1.0/2.0 NW_024970155.1 184035 250003 + AP-2 complex subunit alpha-2 aug3.g9061,aug3.g9060 LOC107457070 0
79 LOC107457517 Ptep1.0/2.0 NW_024971257.1 13855 51591 + G1/S-specific cyclin-D2 aug3.g11246,aug3.g11247 LOC107457517 0
80 LOC107455850 Ptep1.0/2.0 NW_024970537.1 67033 131929 - transmembrane protein 178B aug3.g8086,aug3.g8085 LOC107455850 0
81 LOC107446220 Ptep1.0/2.0 NW_024971225.1 16884 19096 - transcription factor Sox-14-like aug3.g24914,aug3.g24896 LOC107446335,LOC107446220 0
82 LOC107445428 Ptep1.0/2.0 NW_024969822.1 115253 166067 - BMP and activin membrane-bound inhibitor homolog aug3.g18541 LOC107445428 0
83 LOC107457295 Ptep1.0/2.0 NW_024969939.1 225292 235777 + fructose-bisphosphate aldolase aug3.g11046 LOC107457295 0
84 LOC107454790 Ptep1.0/2.0 NW_024969667.1 972409 1099167 + uncharacterized LOC107454790 aug3.g6537,aug3.g6539 LOC107454790 0
85 LOC107445477 Ptep1.0/2.0 NW_024969949.1 217528 251260 - inaD-like protein aug3.g25607 LOC107445477 0
86 LOC107450518 Ptep1.0/2.0 NW_024969639.1 22366 91049 + neurogenic locus Notch protein aug3.g21218 LOC107450518 0
87 LOC107448079 Ptep1.0/2.0 NW_024969687.1 1185366 1275530 + putative epidermal cell surface receptor aug3.g20118 LOC107448079 0
88 LOC107436894 Ptep1.0/2.0 NW_024969612.1 1030321 1221533 + zinc finger protein rotund aug3.g394 LOC107436894 0
89 LOC107450426 Ptep1.0/2.0 NW_024970335.1 26248 62903 - uncharacterized LOC107450426 aug3.g21198,aug3.g21197,aug3.g23025,aug3.g13838 LOC110282465,LOC107450426 0
90 LOC107450121 Ptep1.0/2.0 NW_024970448.1 310544 388521 + CD9 antigen aug3.g10506 LOC107450121 0
91 LOC107454259 Ptep1.0/2.0 NW_024969605.1 411780 811495 - protocadherin-like wing polarity protein stan aug3.g15160,aug3.g6142,aug3.g22281 LOC107454259 0
91 records were found.(Max.=1000)

References
1) Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis. Front. Cell Dev. Biol. 10:933220.
2) Takanori Akaiwa, Hiroki Oda, Yasuko Akiyama-Oda (2025) Genome-wide quantitative dissection of an arthropod segmented body plan at single-cell resolution Communications Biology 8:913.
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Last updated by hiroki oda, 2025.6.12