Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Dataset ID: sn1_st5l | GeneID(LOC) list: cluster_9


word count=127
Gene/Transcript Records
query No.NCBI geneID (-> UMAP)stage 5lstage 7stage 5lstage 7Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
1 LOC122270695 Ptep1.0/2.0 NW_024970320.1 873645 878014 + uncharacterized LOC122270695 aug3.g5030 NA 0
2 LOC107454694 Ptep1.0/2.0 NW_024970806.1 205884 232143 + uncharacterized LOC107454694 aug3.g6462 LOC107454694 0
3 LOC107455809 Ptep1.0/2.0 NW_024969622.1 910621 948089 - exportin-1 aug3.g25803,aug3.g25804 LOC107455809 0
4 LOC107442558 Ptep1.0/2.0 NW_024972028.1 3180 16532 + C-terminal-binding protein aug3.g27685 LOC107442558 0
5 LOC107439655 Ptep1.0/2.0 NW_024969751.1 1353856 1375367 - metacaspase-2 aug3.g13932 LOC107439655 0
6 LOC107448941 Ptep1.0/2.0 NW_024971691.1 25 4695 + uncharacterized LOC107448941 aug3.g10404 LOC107448941 0
7 LOC107448240 Ptep1.0/2.0 NW_024969610.1 719407 731237 + DNA repair protein complementing XP-C cells aug3.g2146,aug3.g23436 LOC107448240 0
8 LOC107448924 Ptep1.0/2.0 NW_024971691.1 15090 17941 - uncharacterized LOC107448924 LOC107448924 0
9 LOC107442802 Ptep1.0/2.0 NW_024970053.1 34208 46669 + small ubiquitin-related modifier aug3.g16835 LOC107442802 0
10 LOC107438928 Ptep1.0/2.0 NW_024970078.1 97867 104578 + neurofilament heavy polypeptide aug3.g26590 LOC107438928 0
11 LOC107451147 Ptep1.0/2.0 NW_024970368.1 357542 383584 - uncharacterized LOC107451147 aug3.g3821 LOC107451147 0
12 LOC107439371 Ptep1.0/2.0 NW_024969632.1 856651 869041 + protein phosphatase 1D aug3.g13725 LOC107439371 0
13 LOC107456196 Ptep1.0/2.0 NW_024971286.1 77656 79854 + N-alpha-acetyltransferase 40 aug3.g8363 LOC107456196 0
14 LOC107438264 Ptep1.0/2.0 NW_024970619.1 63127 109796 - zygotic DNA replication licensing factor mcm3 aug3.g12953 LOC107438264 0
15 LOC107438420 Ptep1.0/2.0 NW_024970170.1 280830 283379 + ubiquitin-conjugating enzyme E2-24 kDa aug3.g9590 LOC107438420 0
16 LOC107441054 Ptep1.0/2.0 NW_024969675.1 353052 358612 + ADP-ribosylation factor-like protein 4C aug3.g9792 LOC107441054 0
17 LOC107451299 Ptep1.0/2.0 NW_024969792.1 146749 154125 + tubulin alpha chain, testis-specific aug3.g10572 LOC107451299 0
18 LOC107449275 Ptep1.0/2.0 NW_024969641.1 2159039 2195348 - innexin inx2 aug3.g10444 LOC107449275 0
19 LOC107455396 Ptep1.0/2.0 NW_024970145.1 5063 30087 + DNA replication licensing factor mcm2 aug3.g7713 LOC107455396 0
20 LOC107446763 Ptep1.0/2.0 NW_024970360.1 11254 43045 - POU domain, class 6, transcription factor 2 aug3.g19365 LOC107446763 0
21 LOC107452384 Ptep1.0/2.0 NW_024970238.1 260616 279288 - tubulin beta-4B chain aug3.g4723 LOC107452384 0
22 LOC107457205 Ptep1.0/2.0 NW_024970798.1 51802 59674 - hepatoma-derived growth factor-related protein 2 aug3.g9191 LOC107457205 0
23 LOC107446756 Ptep1.0/2.0 NW_024971430.1 74436 77012 - histone RNA hairpin-binding protein aug3.g19353 LOC107446756 0
24 LOC107455164 Ptep1.0/2.0 NW_024970360.1 90225 104753 + PHD finger protein 23 aug3.g6885 LOC107455164,LOC107446761 0
25 LOC107448823 Ptep1.0/2.0 NW_024969598.1 807819 817503 + flap endonuclease 1 aug3.g20478 LOC107448823 0
26 LOC107449543 Ptep1.0/2.0 NW_024970706.1 37717 55565 - ribonucleoside-diphosphate reductase subunit M2 aug3.g2820 LOC107449543 0
27 LOC107441464 Ptep1.0/2.0 NW_024969627.1 781141 809423 + SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A aug3.g9832 LOC107441464 0
28 LOC107448467 Ptep1.0/2.0 NW_024971090.1 121923 141120 - serine--tRNA ligase, mitochondrial aug3.g5080,aug3.g20300,aug3.g21584,aug3.g21568 LOC107448467 0
29 LOC107448644 Ptep1.0/2.0 NW_024969804.1 353034 374158 - transcription factor Sp4 aug3.g2326 LOC107448644 0
30 LOC107442502 Ptep1.0/2.0 NW_024970577.1 641695 679377 + E3 ubiquitin-protein ligase TRIP12 aug3.g16621 LOC107442502 0
31 LOC107457539 Ptep1.0/2.0 NW_024969659.1 595765 831003 + zinc finger homeobox protein 3 aug3.g11268 LOC107457539 0
32 LOC107439117 Ptep1.0/2.0 NW_024971135.1 31688 55586 - myb-related protein B aug3.g26678 LOC107439117 0
33 LOC107452781 Ptep1.0/2.0 NW_024969815.1 274961 281528 - U5 small nuclear ribonucleoprotein 200 kDa helicase aug3.g5000 LOC107452781 0
34 LOC107441636 Ptep1.0/2.0 NW_024970565.1 84882 111277 - histone acetyltransferase p300 aug3.g27381,aug3.g27382 LOC107441636 0
35 LOC107449304 Ptep1.0/2.0 NW_024969641.1 2097363 2099972 - innexin inx2-like aug3.g10448 LOC107449304 0
36 LOC107456832 Ptep1.0/2.0 NW_024969653.1 131877 143011 + uncharacterized LOC107456832 aug3.g8858 LOC107456832 0
37 LOC107454099 Ptep1.0/2.0 NW_024969705.1 747505 752960 + nuclear localization sequence-binding protein aug3.g6033 LOC107454099 0
38 LOC107454734 Ptep1.0/2.0 NW_024969796.1 773654 795938 + transcriptional repressor protein YY1 aug3.g6503 LOC107454734 0
39 LOC107437986 Ptep1.0/2.0 NW_024969724.1 382922 386680 - inner centromere protein-like aug3.g25597,aug3.g12711 LOC107437986 0
40 LOC107442525 Ptep1.0/2.0 NW_024969715.1 170804 176032 + protein DDI1 homolog 2 aug3.g16642 LOC107442525 0
41 LOC107443808 Ptep1.0/2.0 NW_024972325.1 2431 18401 + lymphoid-specific helicase aug3.g17469 LOC107443808 0
42 LOC107438930 Ptep1.0/2.0 NW_024970078.1 253817 259250 - protein timeless homolog aug3.g26593 LOC107438930 0
43 LOC107440560 Ptep1.0/2.0 NW_024970468.1 165355 190414 + DNA replication licensing factor MCM6 aug3.g14628 LOC107440560 0
44 LOC107452177 Ptep1.0/2.0 NW_024969968.1 342408 377909 - uncharacterized LOC107452177 aug3.g4575 LOC107452177 0
45 LOC107453644 Ptep1.0/2.0 NW_024970406.1 125590 140849 + chromobox protein homolog 2 aug3.g5646 LOC107453644 0
46 LOC107447080 Ptep1.0/2.0 NW_024969639.1 1459932 1477555 - angiomotin aug3.g19537 LOC107447080 0
47 LOC107451800 Ptep1.0/2.0 NW_024969937.1 222149 258792 + carboxy-terminal kinesin 2 aug3.g4311 LOC107451800 0
48 LOC107454693 Ptep1.0/2.0 NW_024970788.1 3922 65247 + retinoblastoma-like protein 1 aug3.g6461 LOC107454693 0
49 LOC107444619 Ptep1.0/2.0 NW_024969753.1 176143 193549 - ER lumen protein-retaining receptor aug3.g780 LOC107444619 0
50 LOC107455161 Ptep1.0/2.0 NW_024970360.1 170024 175961 - DNA topoisomerase 2-alpha aug3.g6881 LOC107455161 0
51 LOC107455759 Ptep1.0/2.0 NW_024969627.1 1358733 1375940 + meteorin-like protein aug3.g8000 LOC107455759 0
52 LOC107451490 Ptep1.0/2.0 NW_024970373.1 398653 404045 - sporozoite surface protein 2 aug3.g4055 LOC107451490 0
53 LOC107436782 Ptep1.0/2.0 NW_024969864.1 81675 89663 - histone H3.3A aug3.g9473 LOC107436782 0
54 LOC107454653 Ptep1.0/2.0 NW_024969742.1 129078 151105 + uncharacterized LOC107454653 aug3.g24105 LOC107454653 0
55 LOC107456960 Ptep1.0/2.0 NW_024969952.1 625314 668845 + suppressor of cytokine signaling 2 aug3.g25340,aug3.g25341 LOC107456960 0
56 LOC107451817 Ptep1.0/2.0 NW_024971618.1 5263 26226 + splicing factor 3B subunit 2-like aug3.g4323 LOC107451817 0
57 LOC107452647 Ptep1.0/2.0 NW_024969683.1 1140511 1159342 - uncharacterized LOC107452647 aug3.g23644 LOC107452647 0
58 LOC107444439 Ptep1.0/2.0 NW_024969666.1 750984 766580 + UPF0472 protein C16orf72 homolog aug3.g717,aug3.g718 LOC107444439 0
59 LOC107437237 Ptep1.0/2.0 NW_024969862.1 497842 526543 - THO complex subunit 2 aug3.g12138,aug3.g12139 LOC107437237 0
60 LOC107439672 Ptep1.0/2.0 NW_024972112.1 142331 148829 - serine/threonine-protein kinase pim-3 aug3.g13957 LOC107439672 0
61 LOC122270657 Ptep1.0/2.0 NW_024970302.1 171089 172272 + uncharacterized LOC122270657 NA 0
62 LOC107456268 Ptep1.0/2.0 NW_024969649.1 731072 752963 + moesin/ezrin/radixin homolog 1 aug3.g25208 LOC107456268 0
63 LOC107454339 Ptep1.0/2.0 NW_024969677.1 99300 118711 - WD repeat-containing protein 82 aug3.g6206,aug3.g6207 LOC107454339 0
64 LOC107454658 Ptep1.0/2.0 NW_024969742.1 260583 269987 - small nuclear ribonucleoprotein-associated protein B aug3.g24100 LOC107454658 0
65 LOC107442180 Ptep1.0/2.0 NW_024970495.1 338981 341520 + uncharacterized protein DDB_G0286299 aug3.g16410 LOC107442180 0
66 LOC107442927 Ptep1.0/2.0 NW_024971052.1 33401 43140 + uncharacterized LOC107442927 LOC107442927 0
67 LOC107438098 Ptep1.0/2.0 NW_024969629.1 1393755 1425596 + spermatogenesis-associated serine-rich protein 2 aug3.g12823 LOC107438098 0
68 LOC107448618 Ptep1.0/2.0 NW_024969997.1 610169 635757 - uncharacterized LOC107448618 aug3.g15339,aug3.g15338 LOC107448618 0
69 LOC107456035 Ptep1.0/2.0 NW_024970085.1 525831 557278 + homeobox protein B-H1 aug3.g8250 LOC107456035 0
70 LOC107437781 Ptep1.0/2.0 NW_024970300.1 380999 384833 + protein roadkill aug3.g12578 LOC107437781 0
71 LOC107447241 Ptep1.0/2.0 NW_024970614.1 162091 180309 - M-phase inducer phosphatase 1-B aug3.g1671,aug3.g22204 LOC107447241 0
72 LOC107439873 Ptep1.0/2.0 NW_024971046.1 145156 161485 - lamin Dm0 aug3.g7148 LOC107439873 0
73 LOC107456877 Ptep1.0/2.0 NW_024970141.1 588462 605200 + partitioning defective 6 homolog gamma aug3.g8899 LOC107456877 0
74 LOC107454062 Ptep1.0/2.0 NW_024970563.1 151276 159388 + splicing factor 3A subunit 2 aug3.g5990 LOC107454062 0
75 LOC107441637 Ptep1.0/2.0 NW_024970565.1 31225 80223 + DNA replication licensing factor mcm4-A aug3.g27383 LOC107441637 0
76 LOC107441511 Ptep1.0/2.0 NW_024969746.1 646439 672812 + flotillin-1 aug3.g7231,aug3.g880 LOC107441511 0
77 LOC107440211 Ptep1.0/2.0 NW_024969738.1 236589 240212 - apoptosis regulator R11 aug3.g14353 LOC107440211 0
78 LOC107451701 Ptep1.0/2.0 NW_024970096.1 525783 569433 + protein sidekick aug3.g15755 LOC107451701 0
79 LOC107443447 Ptep1.0/2.0 NW_024970249.1 428923 450040 + phosphatidate cytidylyltransferase, photoreceptor-specific aug3.g17231 LOC107443447 0
80 LOC107454846 Ptep1.0/2.0 NW_024970597.1 135149 243858 - RNA-binding protein fusilli aug3.g10830 LOC107454846 0
81 LOC107441179 Ptep1.0/2.0 NW_024969792.1 550824 620514 + protein grainyhead aug3.g27212,aug3.g23194,aug3.g10582 LOC107441179,LOC107451351 0
82 LOC107451223 Ptep1.0/2.0 NW_024971132.1 134491 146793 + uncharacterized protein DDB_G0271670 aug3.g21432 LOC107451223 0
83 LOC107445432 Ptep1.0/2.0 NW_024969868.1 597874 617234 + septin-1 aug3.g18547,aug3.g18548,aug3.g13979 LOC107445431,LOC107445432 0
84 LOC107451764 Ptep1.0/2.0 NW_024971422.1 75051 80609 - serine--tRNA ligase, mitochondrial aug3.g21584 LOC107451764 0
85 LOC107438974 Ptep1.0/2.0 NW_024970040.1 82736 90073 - uncharacterized LOC107438974 aug3.g13502 LOC107438974 0
86 LOC107448908 Ptep1.0/2.0 NW_024969612.1 2967690 2981085 + acidic leucine-rich nuclear phosphoprotein 32 family member A aug3.g15355 LOC107448908 0
87 LOC107455324 Ptep1.0/2.0 NW_024970858.1 104236 122096 - tribbles homolog 2 aug3.g7668 LOC107455324 0
88 LOC107439350 Ptep1.0/2.0 NW_024970014.1 656227 670634 + protein 60A aug3.g13706 LOC107439350 0
89 LOC107451340 Ptep1.0/2.0 NW_024970681.1 79431 81883 - cell division control protein 6 homolog aug3.g3975 LOC107451340 0
90 LOC107438424 Ptep1.0/2.0 NW_024969843.1 707196 752282 - acyl-CoA-binding domain-containing protein 5 aug3.g26488 LOC107438424 0
91 LOC107445161 Ptep1.0/2.0 NW_024970786.1 130681 182446 + uncharacterized LOC107445161 aug3.g18349 LOC107445161 0
92 LOC107442200 Ptep1.0/2.0 NW_024970275.1 113982 155419 + zinc finger MYND domain-containing protein 11 aug3.g16424,aug3.g24943 LOC107442200,LOC107445319 0
93 LOC107455398 Ptep1.0/2.0 NW_024970145.1 452367 463698 + deoxyuridine 5'-triphosphate nucleotidohydrolase aug3.g7728 LOC107455398 0
94 LOC107455293 Ptep1.0/2.0 NW_024970555.1 163235 188116 + uncharacterized LOC107455293 aug3.g6991 LOC107455293,LOC107455296 0
95 LOC107436515 Ptep1.0/2.0 NW_024969973.1 665354 674132 + intracellular coagulation inhibitor 2 aug3.g9433,aug3.g1060 LOC107436515 0
96 LOC107439779 Ptep1.0/2.0 NW_024969772.1 363217 400304 - histone deacetylase complex subunit SAP130 aug3.g14043 LOC107439779 0
97 LOC107441644 Ptep1.0/2.0 NW_024970650.1 251293 263258 - glutamic acid-rich protein aug3.g9841,aug3.g22442 LOC107456510,LOC107441644 0
98 LOC107438957 Ptep1.0/2.0 NW_024969752.1 3152627 3168121 + uncharacterized LOC107438957 aug3.g13486 LOC107438957 0
99 LOC107452759 Ptep1.0/2.0 NW_024969963.1 232686 281841 - DNA polymerase alpha catalytic subunit aug3.g4949,aug3.g24390 LOC107438778,LOC107452759,LOC107446483 0
100 LOC107439705 Ptep1.0/2.0 NW_024971736.1 13615 43344 + catenin alpha aug3.g13984 LOC107439705 0
101 LOC107437627 Ptep1.0/2.0 NW_024969908.1 2979 10034 + cyclic AMP-dependent transcription factor ATF-4 aug3.g26304 LOC107437627 0
102 LOC107442880 Ptep1.0/2.0 NW_024970147.1 514229 532703 - lysine-specific demethylase 4A aug3.g27773 LOC107442880 0
103 LOC107455292 Ptep1.0/2.0 NW_024970555.1 123580 136698 - tumor protein p53-inducible nuclear protein 1 aug3.g6988 LOC107455292 0
104 LOC107440997 Ptep1.0/2.0 NW_024972402.1 15034 24957 - uncharacterized ATP-dependent helicase C29A10.10c-like aug3.g14932 LOC107440997 0
105 LOC107445973 Ptep1.0/2.0 NW_024969716.1 877125 894039 + uncharacterized LOC107445973 aug3.g18851 LOC107445973 0
106 LOC107438931 Ptep1.0/2.0 NW_024970078.1 259474 269024 + cohesin subunit SA-1 aug3.g26594 LOC107438931 0
107 LOC107440488 Ptep1.0/2.0 NW_024969823.1 928795 943259 - replication factor C subunit 5 aug3.g27069 LOC107440488 0
108 LOC107436877 Ptep1.0/2.0 NW_024970684.1 166269 176403 + uncharacterized LOC107436877 aug3.g11894 LOC107436877 0
109 LOC107450425 Ptep1.0/2.0 NW_024970627.1 206385 227480 + serine/threonine-protein phosphatase PP1-gamma catalytic subunit A aug3.g3317 LOC107450425 0
110 LOC107441824 Ptep1.0/2.0 NW_024970037.1 234644 242340 - high mobility group protein HMG-I/HMG-Y aug3.g16166,aug3.g16167 LOC107441824 0
111 LOC107446182 Ptep1.0/2.0 NW_024969882.1 629374 647090 - zinc finger protein 135 aug3.g10168,aug3.g10167 LOC107446182 0
112 LOC107436328 Ptep1.0/2.0 NW_024970421.1 73692 88451 - DCN1-like protein 3 aug3.g26008 LOC107436328 0
113 LOC107452751 Ptep1.0/2.0 NW_024969963.1 601962 612405 + cAMP-responsive element-binding protein-like 2 aug3.g4963 LOC107452751 0
114 LOC107456440 Ptep1.0/2.0 NW_024970119.1 84628 91730 - failed axon connections aug3.g8563 LOC107456440 0
115 LOC107441626 Ptep1.0/2.0 NW_024970000.1 477288 500793 - serine/arginine-rich splicing factor 4 aug3.g27362 LOC107441626 0
116 LOC107449140 Ptep1.0/2.0 NW_024969648.1 2139689 2156204 + serine/threonine-protein phosphatase 4 catalytic subunit aug3.g167 LOC107449140 0
117 LOC107441830 Ptep1.0/2.0 NW_024970930.1 124511 161003 - fringe glycosyltransferase aug3.g27448,aug3.g27447 LOC107441830 0
118 LOC107446816 Ptep1.0/2.0 NW_024971577.1 52782 64968 - activated RNA polymerase II transcriptional coactivator p15 aug3.g19406 LOC107446816 0
119 LOC122268337 Ptep1.0/2.0 NW_024969799.1 364585 370380 + uncharacterized LOC122268337 aug3.g25621 LOC107446018 0
120 LOC107438833 Ptep1.0/2.0 NW_024969620.1 1607966 1636310 - replication protein A 32 kDa subunit-B aug3.g26556 LOC107438833 0
121 LOC107441559 Ptep1.0/2.0 NW_024969785.1 1067054 1081790 - uncharacterized LOC107441559 aug3.g15981 LOC107441559 0
122 LOC107443309 Ptep1.0/2.0 NW_024969897.1 10244 18078 - ATP synthase subunit e, mitochondrial aug3.g9966 LOC107443309 0
123 LOC122271509 Ptep1.0/2.0 NW_024970890.1 107824 120303 + nucleolar protein dao-5-like aug3.g16881 NA 0
124 LOC107446628 Ptep1.0/2.0 NW_024969668.1 134850 159225 - DNA replication licensing factor mcm7-B aug3.g18810,aug3.g24330,aug3.g19316 LOC107442926,LOC107446628 0
125 LOC107440944 Ptep1.0/2.0 NW_024970838.1 91136 98098 - 39S ribosomal protein L53, mitochondrial aug3.g7202 LOC107440944 0
126 LOC122269825 Ptep1.0/2.0 NW_024969946.1 25854 29101 + uncharacterized LOC122269825 aug3.g2951 NA 0
127 LOC107449906 Ptep1.0/2.0 NW_024969759.1 1042000 1077763 + uncharacterized LOC107449906 aug3.g3026,aug3.g22110 LOC107449906 0
127 records were found.(Max.=1000)

References
1) Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis. Front. Cell Dev. Biol. 10:933220.
2) Takanori Akaiwa, Hiroki Oda, Yasuko Akiyama-Oda (2025) Genome-wide quantitative dissection of an arthropod segmented body plan at single-cell resolution Communications Biology 8:913.
[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by hiroki oda, 2025.6.12