Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Dataset ID: sn1_st7 | GeneID(LOC) list: cluster_11


word count=102
Gene/Transcript Records
query No.NCBI geneID (-> UMAP)stage 5lstage 7stage 5lstage 7Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
1 LOC107455062 Ptep1.0/2.0 NW_024969685.1 419755 437139 - homeobox protein SIX3-like aug3.g328 LOC107455062 0
2 LOC107438548 Ptep1.0/2.0 NW_024969695.1 142644 280417 - uncharacterized LOC107438548 aug3.g13175 LOC107438547,LOC107438548 0
3 LOC107452693 Ptep1.0/2.0 NW_024970072.1 2201793 2346781 - eyes absent homolog 1 aug3.g4921 LOC107452693 0
4 LOC107437681 Ptep1.0/2.0 NW_024969619.1 1214402 1294082 + integrin alpha-PS2 aug3.g7077 LOC107437681 0
5 LOC107437526 Ptep1.0/2.0 NW_024969708.1 4442067 4516291 - fibroblast growth factor receptor 3 aug3.g26271 LOC107437526 0
6 LOC107439686 Ptep1.0/2.0 NW_024970262.1 97075 194594 - cardioactive peptide-like aug3.g26877 LOC107439686 0
7 LOC107455285 Ptep1.0/2.0 NW_024970111.1 152980 173757 + abhydrolase domain-containing protein C22H12.03 aug3.g6972 LOC107455285 0
8 LOC107454216 Ptep1.0/2.0 NW_024969911.1 577975 781227 - uncharacterized LOC107454216 aug3.g22085 LOC107445621,LOC107454216 0
9 LOC107445228 Ptep1.0/2.0 NW_024970111.1 88004 113931 - protein gooseberry aug3.g18397 LOC107445228 0
10 LOC107448429 Ptep1.0/2.0 NW_024969636.1 1508196 1528269 + uncharacterized LOC107448429 aug3.g2220 LOC107448429 0
11 LOC107440707 Ptep1.0/2.0 NW_024969921.1 967259 1043762 - homeobox protein Mix.2-like aug3.g27124 LOC107440707 0
12 LOC107438841 Ptep1.0/2.0 NW_024969620.1 1200019 1253063 - fibroblast growth factor receptor 4 aug3.g26566,aug3.g26565 LOC107438841 0
13 LOC107449406 Ptep1.0/2.0 NW_024969596.1 2477764 2705970 - zinc finger MIZ domain-containing protein 1 aug3.g2756,aug3.g2755 LOC107449406 0
14 LOC107440133 Ptep1.0/2.0 NW_024969727.1 1169057 1177116 + twist-related protein 2-like aug3.g14287 LOC107440133 0
15 LOC110281931 Ptep1.0/2.0 NW_024970045.1 113635 430441 + IQ motif and SEC7 domain-containing protein 1 aug3.g2628,aug3.g2626,aug3.g2627,aug3.g22861 LOC110281931,LOC107457505 0
16 LOC107455686 Ptep1.0/2.0 NW_024969831.1 512171 545973 + homeobox protein Hox-A1-like aug3.g7954 LOC107455686 0
17 LOC107438641 Ptep1.0/2.0 NW_024970218.1 160092 282110 + transcription factor Sox-13 aug3.g13250 LOC107438641 0
18 LOC107450937 Ptep1.0/2.0 NW_024970054.1 24316 94432 + uncharacterized LOC107450937 aug3.g10537 LOC107450937 0
19 LOC107436962 Ptep1.0/2.0 NW_024969768.1 680999 689525 - zinc finger homeobox protein 4-like aug3.g26127 LOC107436962 0
20 LOC107450670 Ptep1.0/2.0 NW_024969605.1 1868024 1962441 - uncharacterized LOC107450670 aug3.g15599 LOC107450670 9e-139
21 LOC107452634 Ptep1.0/2.0 NW_024969780.1 473029 527410 - uncharacterized LOC107452634 aug3.g297 LOC107452634 0
22 LOC107437680 Ptep1.0/2.0 NW_024969619.1 1031292 1202597 + polycystic kidney disease 1-related protein aug3.g7076 LOC107437695,LOC107437680 0
23 LOC107449707 Ptep1.0/2.0 NW_024969700.1 1456116 1523099 + abnormal cell migration protein 10 aug3.g2910,aug3.g2911 LOC107449707 0
24 LOC107457317 Ptep1.0/2.0 NW_024971129.1 18367 41583 + uncharacterized protein DDB_G0286299 aug3.g11065 LOC107457317 0
25 LOC107453972 Ptep1.0/2.0 NW_024969825.1 366399 372061 + cuticle protein 14-like aug3.g10758 LOC107453972 0
26 LOC107444341 Ptep1.0/2.0 NW_024970110.1 358081 521001 - zinc finger and BTB domain-containing protein 24 aug3.g17796 LOC107444341 0
27 LOC107451770 Ptep1.0/2.0 NW_024970268.1 200360 257176 + uncharacterized LOC107451770 aug3.g4286 LOC107451770 0
28 LOC107452697 Ptep1.0/2.0 NW_024970072.1 2462783 2493037 - CDK5 and ABL1 enzyme substrate 2 aug3.g4917 LOC107452697 0
29 LOC122268898 Ptep1.0/2.0 NW_024969700.1 1523870 1526884 + uncharacterized LOC122268898 aug3.g2909 NA 0
30 LOC107447499 Ptep1.0/2.0 NW_024969702.1 1206168 1373996 + uncharacterized LOC107447499 LOC107447499 0
31 LOC107442103 Ptep1.0/2.0 NW_024969652.1 1183019 1200504 + transmembrane protein 127 aug3.g27530 LOC107442103 0
32 LOC107447307 Ptep1.0/2.0 NW_024971214.1 14262 18868 + uncharacterized LOC107447307 aug3.g21167 LOC107447307 0
33 LOC107451631 Ptep1.0/2.0 NW_024970632.1 91730 123570 + protein odd-skipped-related 2 aug3.g21549,aug3.g17123 LOC107451631 0
34 LOC107441660 Ptep1.0/2.0 NW_024970650.1 7267 100342 - unconventional myosin-Ie aug3.g9845,aug3.g9846,aug3.g22123 LOC107441660 0
35 LOC107446990 Ptep1.0/2.0 NW_024969684.1 1221620 1594117 - zinc finger E-box-binding homeobox 2 aug3.g19505,aug3.g10715 LOC107446990 0
36 LOC107455689 Ptep1.0/2.0 NW_024969831.1 316795 392166 + homeotic protein proboscipedia aug3.g7953 LOC107455689 0
37 LOC107450380 Ptep1.0/2.0 NW_024969707.1 851426 852082 - uncharacterized protein y4hQ aug3.g3292 LOC107450380 0
38 LOC107451344 Ptep1.0/2.0 NW_024970574.1 112405 178111 + protein c-ets-1-B aug3.g3965,aug3.g3964 LOC107451344 0
39 LOC110283330 Ptep1.0/2.0 NW_024972665.1 10652 15547 + uncharacterized LOC110283330 aug3.g21167,aug3.g11138 LOC110283330 0
40 LOC107438862 Ptep1.0/2.0 NW_024970829.1 20974 163087 - sodium bicarbonate cotransporter 3 aug3.g13411 LOC107438862 0
41 LOC107445627 Ptep1.0/2.0 NW_024969645.1 618873 712055 - uncharacterized LOC107445627 aug3.g1111,aug3.g21915 LOC110282090,LOC107445627 0
42 LOC107450518 Ptep1.0/2.0 NW_024969639.1 22366 91049 + neurogenic locus Notch protein aug3.g21218 LOC107450518 0
43 LOC107455688 Ptep1.0/2.0 NW_024969831.1 408849 511729 - uncharacterized LOC107455688 LOC107455688 0
44 LOC107439017 Ptep1.0/2.0 NW_024969598.1 640756 730056 - protein bark beetle aug3.g26649 LOC107439017 0
45 LOC107436092 Ptep1.0/2.0 NW_024969684.1 869776 900674 - LIM domain only protein 3 aug3.g11301 LOC107436092 0
46 LOC107437002 Ptep1.0/2.0 NW_024971413.1 64921 188667 + adhesion G protein-coupled receptor L1 aug3.g9493 LOC107437002 0
47 LOC107451065 Ptep1.0/2.0 NW_024970818.1 90770 153199 + uncharacterized LOC107451065 aug3.g3755 LOC107451065 0
48 LOC107442128 Ptep1.0/2.0 NW_024969699.1 585880 596674 - peptidyl-prolyl cis-trans isomerase B aug3.g16376 LOC107442128 0
49 LOC107438714 Ptep1.0/2.0 NW_024970015.1 652540 747387 + transcriptional activator cubitus interruptus-like aug3.g13321 LOC107438714 0
50 LOC107447768 Ptep1.0/2.0 NW_024970237.1 140790 298092 - CRISP/Allergen/PR-1 aug3.g1919 LOC107447768 0
51 LOC107444253 Ptep1.0/2.0 NW_024970103.1 404502 414936 - transcription factor HES-1-A aug3.g17723 LOC107444253 0
52 LOC107440074 Ptep1.0/2.0 NW_024969612.1 558796 580628 + uncharacterized LOC107440074 aug3.g407 LOC107440074,LOC107449165 0
53 LOC107442485 Ptep1.0/2.0 NW_024970178.1 423546 524727 - partitioning defective 3 homolog aug3.g27669 LOC107442485 0
54 LOC107451332 Ptep1.0/2.0 NW_024970574.1 30477 76012 + uncharacterized LOC107451332 aug3.g3963,aug3.g15729 LOC110283199,LOC107451332 0
55 LOC107443967 Ptep1.0/2.0 NW_024970906.1 151847 170537 - homeobox protein XHOX-3 aug3.g17585 LOC107443967 0
56 LOC107436875 Ptep1.0/2.0 NW_024969629.1 1275459 1301754 + uncharacterized LOC107436875 aug3.g9478 LOC107436875 0
57 LOC107450121 Ptep1.0/2.0 NW_024970448.1 310544 388521 + CD9 antigen aug3.g10506 LOC107450121 0
58 LOC107446095 Ptep1.0/2.0 NW_024969638.1 434746 478809 + ER degradation-enhancing alpha-mannosidase-like protein 3 aug3.g1221 LOC107446095 0
59 LOC107439406 Ptep1.0/2.0 NW_024969836.1 12654 32271 + CAAX prenyl protease 1 homolog aug3.g13751 LOC107439406 0
60 LOC107446080 Ptep1.0/2.0 NW_024969727.1 155592 168820 - cyclin-dependent kinase 20 aug3.g1238 LOC107446080 0
61 LOC107447726 Ptep1.0/2.0 NW_024969606.1 1474516 1536728 - sortilin-related receptor aug3.g1894,aug3.g1895 LOC107447726 0
62 LOC107443537 Ptep1.0/2.0 NW_024969659.1 478057 505195 - uncharacterized LOC107443537 aug3.g471 LOC107443537 0
63 LOC107438974 Ptep1.0/2.0 NW_024970040.1 82736 90073 - uncharacterized LOC107438974 aug3.g13502 LOC107438974 0
64 LOC107450449 Ptep1.0/2.0 NW_024970077.1 572959 592631 - mRNA decay activator protein ZFP36L1 aug3.g3346 LOC107450449 0
65 LOC107450033 Ptep1.0/2.0 NW_024969620.1 73575 233208 + protein pangolin, isoforms A/H/I/S aug3.g10490,aug3.g18357 LOC107450033 0
66 LOC107440811 Ptep1.0/2.0 NW_024969740.1 1512520 1540112 + centrosomal protein of 290 kDa aug3.g27157,aug3.g27156 LOC107440811 0
67 LOC107444705 Ptep1.0/2.0 NW_024969653.1 1472468 1507517 - uncharacterized LOC107444705 aug3.g18031 LOC107444705 0
68 LOC107456960 Ptep1.0/2.0 NW_024969952.1 625314 668845 + suppressor of cytokine signaling 2 aug3.g25340,aug3.g25341 LOC107456960 0
69 LOC107437929 Ptep1.0/2.0 NW_024970636.1 160188 174138 + intraflagellar transport protein 74 homolog aug3.g12681 LOC107437929 0
70 LOC107454132 Ptep1.0/2.0 NW_024969759.1 369574 430014 - toll-like receptor Tollo aug3.g6063 LOC107454132 0
71 LOC107445982 Ptep1.0/2.0 NW_024970690.1 234050 248326 - putative uncharacterized protein DDB_G0282133 aug3.g8415,aug3.g18862 LOC107445982 0
72 LOC107443783 Ptep1.0/2.0 NW_024969706.1 2038945 2314643 - plexin-A2 aug3.g428 LOC107443783 0
73 LOC107449413 Ptep1.0/2.0 NW_024971544.1 167438 205991 + runt-related transcription factor 1 aug3.g2762 LOC107449413 0
74 LOC107449498 Ptep1.0/2.0 NW_024970258.1 99236 152160 + serine proteinase stubble aug3.g15440 LOC107449498 0
75 LOC107440815 Ptep1.0/2.0 NW_024969740.1 831424 847182 - uncharacterized LOC107440815 aug3.g27168 LOC107440815 0
76 LOC107457354 Ptep1.0/2.0 NW_024969595.1 1592309 1623716 + renin receptor aug3.g25876 LOC107457354 0
77 LOC107449875 Ptep1.0/2.0 NW_024969609.1 999032 1014778 + sphingolipid delta(4)-desaturase DES1 aug3.g10482 LOC107449875 0
78 LOC107444665 Ptep1.0/2.0 NW_024970315.1 268279 295533 + nuclear receptor subfamily 2 group E member 1 aug3.g794 LOC107444665 0
79 LOC107446878 Ptep1.0/2.0 NW_024969797.1 618608 700718 - AT-rich interactive domain-containing protein 5B aug3.g1504 LOC107446878 0
80 LOC107453447 Ptep1.0/2.0 NW_024970102.1 247030 311279 - sprouty-related, EVH1 domain-containing protein 2 aug3.g5499 LOC107453447 0
81 LOC107438301 Ptep1.0/2.0 NW_024970082.1 78025 165064 + zinc finger protein 236 aug3.g12961 LOC107438301 0
82 LOC122271930 Ptep1.0/2.0 NW_024971301.1 17866 23293 - uncharacterized LOC122271930 aug3.g7978 NA 5e-39
83 LOC107446375 Ptep1.0/2.0 NW_024971413.1 294109 372126 - carboxypeptidase D aug3.g19121 LOC107446375 0
84 LOC107449169 Ptep1.0/2.0 NW_024969689.1 525991 535716 + uncharacterized LOC107449169 aug3.g15391 LOC107449169 0
85 LOC122271545 Ptep1.0/2.0 NW_024970920.1 42550 50805 + uncharacterized LOC122271545 NA 0
86 LOC107440240 Ptep1.0/2.0 NW_024970743.1 104190 175589 - protein patched-like aug3.g14374 LOC107440240 0
87 LOC107454021 Ptep1.0/2.0 NW_024970505.1 286281 337645 - matrix metalloproteinase-2 aug3.g5969 LOC107454021 0
88 LOC107449622 Ptep1.0/2.0 NW_024969901.1 167704 184690 - zinc transporter ZIP9 aug3.g2867 LOC107449622 0
89 LOC107443419 Ptep1.0/2.0 NW_024970450.1 9591 46074 + carnitine O-palmitoyltransferase 1, muscle isoform aug3.g17212 LOC107443419 0
90 LOC107451548 Ptep1.0/2.0 NW_024970633.1 297942 325409 - DNA repair protein XRCC1 aug3.g15731 LOC107451548 0
91 LOC107453667 Ptep1.0/2.0 NW_024969708.1 1295404 1338283 - uncharacterized LOC107453667 aug3.g5672 LOC107453667 0
92 LOC107453540 Ptep1.0/2.0 NW_024970087.1 488106 518390 + kinesin-like protein KIF3A aug3.g5560 LOC107453540 0
93 LOC107436398 Ptep1.0/2.0 NW_024969724.1 8661 44794 + biorientation of chromosomes in cell division protein 1-like 1 aug3.g11517,aug3.g16506 LOC107436398,LOC110282453 0
94 LOC107451348 Ptep1.0/2.0 NW_024970681.1 4220 19077 + uncharacterized LOC107451348 LOC107451348 0
95 LOC107442086 Ptep1.0/2.0 NW_024969781.1 4404709 4418842 + GTP-binding protein 10 aug3.g16351 LOC107442086 0
96 LOC107456506 Ptep1.0/2.0 NW_024970253.1 263882 337503 + uncharacterized LOC107456506 aug3.g8629 LOC107456506 0
97 LOC107448091 Ptep1.0/2.0 NW_024970074.1 147787 268066 - rab11 family-interacting protein 4B aug3.g2082,aug3.g22713 LOC107447465,LOC107448091 0
98 LOC107447651 Ptep1.0/2.0 NW_024970442.1 18729 40945 - uncharacterized LOC107447651 aug3.g1855,aug3.g1854 LOC107447651 0
99 LOC107452256 Ptep1.0/2.0 NW_024970909.1 95601 179483 - gamma-aminobutyric acid type B receptor subunit 1 aug3.g21700,aug3.g16485 LOC107452256 0
100 LOC107436088 Ptep1.0/2.0 NW_024969820.1 203727 229762 - uncharacterized LOC107436088 aug3.g9384 LOC107436088 0
101 LOC107450194 Ptep1.0/2.0 NW_024970128.1 502540 553252 - glucosidase 2 subunit beta aug3.g21121,aug3.g21122 LOC107450194 0
102 LOC107439423 Ptep1.0/2.0 NW_024969979.1 548327 573049 - S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 aug3.g13764 LOC107439423 0
102 records were found.(Max.=1000)

References
1) Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis. Front. Cell Dev. Biol. 10:933220.
2) Takanori Akaiwa, Hiroki Oda, Yasuko Akiyama-Oda (2025) Genome-wide quantitative dissection of an arthropod segmented body plan at single-cell resolution Communications Biology 8:913.
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Last updated by hiroki oda, 2025.6.12