Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Dataset ID: sn1_st7 | GeneID(LOC) list: cluster_22


word count=102
Gene/Transcript Records
query No.NCBI geneID (-> UMAP)stage 5lstage 7stage 5lstage 7Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
1 LOC107457003 Ptep1.0/2.0 NW_024969801.1 4601155 4602991 + uncharacterized LOC107457003 aug3.g8996 LOC107457003 0
2 LOC107440074 Ptep1.0/2.0 NW_024969612.1 558796 580628 + uncharacterized LOC107440074 aug3.g407 LOC107440074,LOC107449165 0
3 LOC107441197 Ptep1.0/2.0 NW_024969792.1 1031886 1084581 - uncharacterized LOC107441197 aug3.g27229 LOC107441197 0
4 LOC107451108 Ptep1.0/2.0 NW_024970282.1 147413 248907 + optomotor-blind protein aug3.g3790 LOC107451108 0
5 LOC107450982 Ptep1.0/2.0 NW_024969876.1 890937 894823 - cuticle protein 16.5-like aug3.g3749 LOC107450982 0
6 LOC107438548 Ptep1.0/2.0 NW_024969695.1 142644 280417 - uncharacterized LOC107438548 aug3.g13175 LOC107438547,LOC107438548 0
7 LOC107450670 Ptep1.0/2.0 NW_024969605.1 1868024 1962441 - uncharacterized LOC107450670 aug3.g15599 LOC107450670 9e-139
8 LOC107439686 Ptep1.0/2.0 NW_024970262.1 97075 194594 - cardioactive peptide-like aug3.g26877 LOC107439686 0
9 LOC107447499 Ptep1.0/2.0 NW_024969702.1 1206168 1373996 + uncharacterized LOC107447499 LOC107447499 0
10 LOC107437526 Ptep1.0/2.0 NW_024969708.1 4442067 4516291 - fibroblast growth factor receptor 3 aug3.g26271 LOC107437526 0
11 LOC107438841 Ptep1.0/2.0 NW_024969620.1 1200019 1253063 - fibroblast growth factor receptor 4 aug3.g26566,aug3.g26565 LOC107438841 0
12 LOC107444744 Ptep1.0/2.0 NW_024969596.1 1108746 1179192 - transcription factor SOX-8 aug3.g816 LOC107444744 0
13 LOC107448880 Ptep1.0/2.0 NW_024969637.1 1679705 1993013 + endothelial transcription factor GATA-2-like aug3.g20514 LOC107448880 0
14 LOC107457317 Ptep1.0/2.0 NW_024971129.1 18367 41583 + uncharacterized protein DDB_G0286299 aug3.g11065 LOC107457317 0
15 LOC107437910 Ptep1.0/2.0 NW_024971560.1 24940 53800 + homeobox protein CDX-1-like aug3.g12643 LOC107437910 0
16 LOC107436467 Ptep1.0/2.0 NW_024970371.1 304580 336869 + homeobox protein six1 aug3.g26047 LOC107436467 0
17 LOC107452693 Ptep1.0/2.0 NW_024970072.1 2201793 2346781 - eyes absent homolog 1 aug3.g4921 LOC107452693 0
18 LOC107455285 Ptep1.0/2.0 NW_024970111.1 152980 173757 + abhydrolase domain-containing protein C22H12.03 aug3.g6972 LOC107455285 0
19 LOC107449406 Ptep1.0/2.0 NW_024969596.1 2477764 2705970 - zinc finger MIZ domain-containing protein 1 aug3.g2756,aug3.g2755 LOC107449406 0
20 LOC107450449 Ptep1.0/2.0 NW_024970077.1 572959 592631 - mRNA decay activator protein ZFP36L1 aug3.g3346 LOC107450449 0
21 LOC107436962 Ptep1.0/2.0 NW_024969768.1 680999 689525 - zinc finger homeobox protein 4-like aug3.g26127 LOC107436962 0
22 LOC107443967 Ptep1.0/2.0 NW_024970906.1 151847 170537 - homeobox protein XHOX-3 aug3.g17585 LOC107443967 0
23 LOC107454132 Ptep1.0/2.0 NW_024969759.1 369574 430014 - toll-like receptor Tollo aug3.g6063 LOC107454132 0
24 LOC107452266 Ptep1.0/2.0 NW_024970376.1 88312 145112 - dentin sialophosphoprotein aug3.g4638 LOC107452266 0
25 LOC107437170 Ptep1.0/2.0 NW_024970712.1 161408 210229 + claudin domain-containing protein 1 aug3.g12091 LOC107437170 0
26 LOC107440240 Ptep1.0/2.0 NW_024970743.1 104190 175589 - protein patched-like aug3.g14374 LOC107440240 0
27 LOC107451065 Ptep1.0/2.0 NW_024970818.1 90770 153199 + uncharacterized LOC107451065 aug3.g3755 LOC107451065 0
28 LOC107437564 Ptep1.0/2.0 NW_024970114.1 1438948 1477637 - uncharacterized LOC107437564 aug3.g12420 LOC107437564 0
29 LOC107440710 Ptep1.0/2.0 NW_024969921.1 825304 958893 + uncharacterized LOC107440710 aug3.g27125 LOC107440710 2e-74
30 LOC107437929 Ptep1.0/2.0 NW_024970636.1 160188 174138 + intraflagellar transport protein 74 homolog aug3.g12681 LOC107437929 0
31 LOC107455759 Ptep1.0/2.0 NW_024969627.1 1358733 1375940 + meteorin-like protein aug3.g8000 LOC107455759 0
32 LOC107456506 Ptep1.0/2.0 NW_024970253.1 263882 337503 + uncharacterized LOC107456506 aug3.g8629 LOC107456506 0
33 LOC107438301 Ptep1.0/2.0 NW_024970082.1 78025 165064 + zinc finger protein 236 aug3.g12961 LOC107438301 0
34 LOC107450380 Ptep1.0/2.0 NW_024969707.1 851426 852082 - uncharacterized protein y4hQ aug3.g3292 LOC107450380 0
35 LOC122271984 Ptep1.0/2.0 NW_024971373.1 7 3390 + uncharacterized LOC122271984 NA 0
36 LOC107447242 Ptep1.0/2.0 NW_024970614.1 216156 263280 + protein big brother aug3.g1672 LOC107447242 0
37 LOC107442103 Ptep1.0/2.0 NW_024969652.1 1183019 1200504 + transmembrane protein 127 aug3.g27530 LOC107442103 0
38 LOC107436875 Ptep1.0/2.0 NW_024969629.1 1275459 1301754 + uncharacterized LOC107436875 aug3.g9478 LOC107436875 0
39 LOC122269420 Ptep1.0/2.0 NW_024969815.1 132116 141676 - uncharacterized LOC122269420 aug3.g4993 NA 3e-148
40 LOC107451942 Ptep1.0/2.0 NW_024970461.1 153699 226970 + protein NDNF aug3.g4413 LOC107451942 0
41 LOC122268898 Ptep1.0/2.0 NW_024969700.1 1523870 1526884 + uncharacterized LOC122268898 aug3.g2909 NA 0
42 LOC107449707 Ptep1.0/2.0 NW_024969700.1 1456116 1523099 + abnormal cell migration protein 10 aug3.g2910,aug3.g2911 LOC107449707 0
43 LOC107452697 Ptep1.0/2.0 NW_024970072.1 2462783 2493037 - CDK5 and ABL1 enzyme substrate 2 aug3.g4917 LOC107452697 0
44 LOC107437681 Ptep1.0/2.0 NW_024969619.1 1214402 1294082 + integrin alpha-PS2 aug3.g7077 LOC107437681 0
45 LOC107440831 Ptep1.0/2.0 NW_024969790.1 521367 623998 - peroxidasin aug3.g14855,aug3.g24276 LOC107440831 0
46 LOC107438974 Ptep1.0/2.0 NW_024970040.1 82736 90073 - uncharacterized LOC107438974 aug3.g13502 LOC107438974 0
47 LOC107445982 Ptep1.0/2.0 NW_024970690.1 234050 248326 - putative uncharacterized protein DDB_G0282133 aug3.g8415,aug3.g18862 LOC107445982 0
48 LOC107455997 Ptep1.0/2.0 NW_024970108.1 269825 273421 + putative transcription factor SOX-14 aug3.g8208 LOC107455997 0
49 LOC107438862 Ptep1.0/2.0 NW_024970829.1 20974 163087 - sodium bicarbonate cotransporter 3 aug3.g13411 LOC107438862 0
50 LOC107438905 Ptep1.0/2.0 NW_024969664.1 1194758 1207932 + uncharacterized LOC107438905 aug3.g9628 LOC107438905 0
51 LOC107451348 Ptep1.0/2.0 NW_024970681.1 4220 19077 + uncharacterized LOC107451348 LOC107451348 0
52 LOC107442388 Ptep1.0/2.0 NW_024970600.1 216334 222014 + protein FAM43A aug3.g27619 LOC107442388 0
53 LOC107453822 Ptep1.0/2.0 NW_024969820.1 608019 641067 + midnolin-A aug3.g5791 LOC107453822 0
54 LOC107453671 Ptep1.0/2.0 NW_024969708.1 1347456 1385463 - silent chromatin protein ESC1 aug3.g5674 LOC107453671 0
55 LOC107447726 Ptep1.0/2.0 NW_024969606.1 1474516 1536728 - sortilin-related receptor aug3.g1894,aug3.g1895 LOC107447726 0
56 LOC107452215 Ptep1.0/2.0 NW_024969686.1 1262457 1410355 - Krueppel-like factor 7 aug3.g4601 LOC107452215 0
57 LOC107457039 Ptep1.0/2.0 NW_024969702.1 2286399 2311370 - homeobox protein Hox-A9b aug3.g25355 LOC107457039 0
58 LOC107450518 Ptep1.0/2.0 NW_024969639.1 22366 91049 + neurogenic locus Notch protein aug3.g21218 LOC107450518 0
59 LOC107448429 Ptep1.0/2.0 NW_024969636.1 1508196 1528269 + uncharacterized LOC107448429 aug3.g2220 LOC107448429 0
60 LOC107444253 Ptep1.0/2.0 NW_024970103.1 404502 414936 - transcription factor HES-1-A aug3.g17723 LOC107444253 0
61 LOC107446561 Ptep1.0/2.0 NW_024970340.1 276515 329441 + small conductance calcium-activated potassium channel protein aug3.g1380,aug3.g23104 LOC107446561 0
62 LOC107456087 Ptep1.0/2.0 NW_024970287.1 30058 52352 - uncharacterized LOC107456087 aug3.g8290 LOC107456087 0
63 LOC107437715 Ptep1.0/2.0 NW_024970461.1 746726 979108 + solute carrier organic anion transporter family member 74D aug3.g9550 LOC107437715 0
64 LOC107454926 Ptep1.0/2.0 NW_024970708.1 205351 232208 + bcl-2-like protein 1 aug3.g23010,aug3.g6695,aug3.g6694 LOC107454925,LOC107454926 0
65 LOC107440453 Ptep1.0/2.0 NW_024969955.1 310854 360310 + histone acetyltransferase KAT5 aug3.g14550 LOC107440453 0
66 LOC122271545 Ptep1.0/2.0 NW_024970920.1 42550 50805 + uncharacterized LOC122271545 NA 0
67 LOC107447835 Ptep1.0/2.0 NW_024969765.1 2126 106892 + band 3 anion transport protein aug3.g1947 LOC107447835 0
68 LOC107442128 Ptep1.0/2.0 NW_024969699.1 585880 596674 - peptidyl-prolyl cis-trans isomerase B aug3.g16376 LOC107442128 0
69 LOC107450796 Ptep1.0/2.0 NW_024971444.1 51993 78419 - cathepsin L-like aug3.g3631 LOC107450796 0
70 LOC107447988 Ptep1.0/2.0 NW_024969607.1 1626712 1632663 - homeobox protein engrailed-like ceh-16 aug3.g15243 LOC107447988 0
71 LOC107439017 Ptep1.0/2.0 NW_024969598.1 640756 730056 - protein bark beetle aug3.g26649 LOC107439017 0
72 LOC107447617 Ptep1.0/2.0 NW_024969691.1 691926 818570 - tyrosine-protein phosphatase non-receptor type 13 aug3.g14476,aug3.g1826 LOC107447617 0
73 LOC107457539 Ptep1.0/2.0 NW_024969659.1 595765 831003 + zinc finger homeobox protein 3 aug3.g11268 LOC107457539 0
74 LOC107446095 Ptep1.0/2.0 NW_024969638.1 434746 478809 + ER degradation-enhancing alpha-mannosidase-like protein 3 aug3.g1221 LOC107446095 0
75 LOC107441771 Ptep1.0/2.0 NW_024969625.1 206169 594447 + protein tiptop aug3.g25516 LOC107441771 0
76 LOC107437003 Ptep1.0/2.0 NW_024969763.1 975297 981650 + uncharacterized LOC107437003 aug3.g11953 LOC107437003 0
77 LOC107437034 Ptep1.0/2.0 NW_024970136.1 374501 413627 + Fanconi anemia group M protein aug3.g26151 LOC107437034 0
78 LOC107444341 Ptep1.0/2.0 NW_024970110.1 358081 521001 - zinc finger and BTB domain-containing protein 24 aug3.g17796 LOC107444341 0
79 LOC107442523 Ptep1.0/2.0 NW_024969715.1 128774 144675 + protein AAR2 homolog aug3.g16645 LOC107442523 0
80 LOC107445873 Ptep1.0/2.0 NW_024970153.1 524012 533816 - uncharacterized LOC107445873 aug3.g1186 LOC107445873 0
81 LOC107454216 Ptep1.0/2.0 NW_024969911.1 577975 781227 - uncharacterized LOC107454216 aug3.g22085 LOC107445621,LOC107454216 0
82 LOC107440428 Ptep1.0/2.0 NW_024970072.1 398 26867 - structural maintenance of chromosomes protein 6 aug3.g21848 LOC107440428 0
83 LOC107442485 Ptep1.0/2.0 NW_024970178.1 423546 524727 - partitioning defective 3 homolog aug3.g27669 LOC107442485 0
84 LOC107454341 Ptep1.0/2.0 NW_024969677.1 159801 259160 - dystroglycan aug3.g6203 LOC107454341 0
85 LOC107440931 Ptep1.0/2.0 NW_024969752.1 1887629 1896329 - protein C10 aug3.g84 LOC107440931 0
86 LOC107440539 Ptep1.0/2.0 NW_024970393.1 338669 374857 - transforming growth factor beta receptor type 3 aug3.g27094 LOC107440539 0
87 LOC107444234 Ptep1.0/2.0 NW_024970261.1 149158 155684 + uncharacterized LOC107444234 aug3.g17709 LOC107444234 0
88 LOC107455328 Ptep1.0/2.0 NW_024970759.1 68145 85741 + translocation protein SEC62 aug3.g7659,aug3.g22208 LOC107455328 0
89 LOC110281931 Ptep1.0/2.0 NW_024970045.1 113635 430441 + IQ motif and SEC7 domain-containing protein 1 aug3.g2628,aug3.g2626,aug3.g2627,aug3.g22861 LOC110281931,LOC107457505 0
90 LOC107451805 Ptep1.0/2.0 NW_024971416.1 50363 82111 + lysine-specific demethylase 2A aug3.g21601,aug3.g24687 LOC107451805 0
91 LOC107438641 Ptep1.0/2.0 NW_024970218.1 160092 282110 + transcription factor Sox-13 aug3.g13250 LOC107438641 0
92 LOC107440811 Ptep1.0/2.0 NW_024969740.1 1512520 1540112 + centrosomal protein of 290 kDa aug3.g27157,aug3.g27156 LOC107440811 0
93 LOC107446184 Ptep1.0/2.0 NW_024970024.1 518122 552347 - BRD4-interacting chromatin-remodeling complex-associated protein aug3.g1263 LOC107446184 0
94 LOC107450335 Ptep1.0/2.0 NW_024969819.1 2114835 2277923 + zinc finger protein basonuclin-2 aug3.g3273 LOC107450335 0
95 LOC107452788 Ptep1.0/2.0 NW_024969815.1 150334 160615 + uncharacterized LOC107452788 aug3.g4994 LOC107452788 0
96 LOC107457354 Ptep1.0/2.0 NW_024969595.1 1592309 1623716 + renin receptor aug3.g25876 LOC107457354 0
97 LOC107452386 Ptep1.0/2.0 NW_024970238.1 409935 448706 - uncharacterized LOC107452386 aug3.g4726 LOC107442165,LOC107452386 0
98 LOC107437962 Ptep1.0/2.0 NW_024970324.1 342455 425034 - calcium homeostasis modulator protein 6 aug3.g9571,aug3.g10115,aug3.g9570 LOC107445249,LOC107437962 0
99 LOC107454274 Ptep1.0/2.0 NW_024969889.1 314312 336018 + uncharacterized LOC107454274 aug3.g24003 LOC107454274 0
100 LOC107443073 Ptep1.0/2.0 NW_024970066.1 247350 327291 + serine-rich adhesin for platelets aug3.g7333 LOC107443073 0
101 LOC107449169 Ptep1.0/2.0 NW_024969689.1 525991 535716 + uncharacterized LOC107449169 aug3.g15391 LOC107449169 0
102 LOC107456262 Ptep1.0/2.0 NW_024969649.1 606631 641728 - ralBP1-associated Eps domain-containing protein 1 aug3.g25211,aug3.g25212 LOC107456262 0
102 records were found.(Max.=1000)

References
1) Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis. Front. Cell Dev. Biol. 10:933220.
2) Takanori Akaiwa, Hiroki Oda, Yasuko Akiyama-Oda (2025) Genome-wide quantitative dissection of an arthropod segmented body plan at single-cell resolution Communications Biology 8:913.
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Last updated by hiroki oda, 2025.6.12