Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Dataset ID: sn1_st7 | GeneID(LOC) list: cluster_25


word count=81
Gene/Transcript Records
query No.NCBI geneID (-> UMAP)stage 5lstage 7stage 5lstage 7Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
1 LOC107451817 Ptep1.0/2.0 NW_024971618.1 5263 26226 + splicing factor 3B subunit 2-like aug3.g4323 LOC107451817 0
2 LOC107438928 Ptep1.0/2.0 NW_024970078.1 97867 104578 + neurofilament heavy polypeptide aug3.g26590 LOC107438928 0
3 LOC107441994 Ptep1.0/2.0 NW_024970032.1 665983 690162 + histone-lysine N-methyltransferase EHMT2 aug3.g7289 LOC107441994 0
4 LOC107444808 Ptep1.0/2.0 NW_024971209.1 50287 82894 - uncharacterized LOC107444808 aug3.g18118 LOC107444808 0
5 LOC107451346 Ptep1.0/2.0 NW_024969701.1 587386 878494 - latrophilin Cirl aug3.g25404 LOC107451346 0
6 LOC107455936 Ptep1.0/2.0 NW_024969746.1 1588789 1627544 + histone-lysine N-methyltransferase SETD2 aug3.g8161,aug3.g17463 LOC107455936 0
7 LOC107437986 Ptep1.0/2.0 NW_024969724.1 382922 386680 - inner centromere protein-like aug3.g25597,aug3.g12711 LOC107437986 0
8 LOC107448205 Ptep1.0/2.0 NW_024971218.1 15985 67223 - protein kinase C-binding protein 1 aug3.g2135 LOC107448205 0
9 LOC107454694 Ptep1.0/2.0 NW_024970806.1 205884 232143 + uncharacterized LOC107454694 aug3.g6462 LOC107454694 0
10 LOC107438015 Ptep1.0/2.0 NW_024970324.1 150825 183689 - growth arrest-specific protein 1 aug3.g9575 LOC107438015 0
11 LOC107443845 Ptep1.0/2.0 NW_024970584.1 166164 198882 - uncharacterized LOC107443845 aug3.g547 LOC107443845 0
12 LOC110283238 Ptep1.0/2.0 NW_024970043.1 407427 439010 + uncharacterized LOC110283238 aug3.g12945 LOC110283238 0
13 LOC107442697 Ptep1.0/2.0 NW_024970310.1 261779 278084 - DNA repair protein complementing XP-C cells homolog aug3.g16754,aug3.g2146 LOC107442697 0
14 LOC107443581 Ptep1.0/2.0 NW_024969864.1 589194 594249 + uncharacterized LOC107443581 aug3.g17333 LOC107443581 0
15 LOC107443656 Ptep1.0/2.0 NW_024969932.1 809183 897612 - transcriptional regulator ATRX homolog aug3.g17375 LOC107443656 0
16 LOC107457197 Ptep1.0/2.0 NW_024971464.1 5388 59109 - uncharacterized LOC107457197 aug3.g9180,aug3.g9179 LOC107457197 0
17 LOC107452558 Ptep1.0/2.0 NW_024970093.1 209610 264085 - uncharacterized LOC107452558 aug3.g4845 LOC107452558 0
18 LOC107444150 Ptep1.0/2.0 NW_024971778.1 1381 26448 + uncharacterized LOC107444150 aug3.g17650 LOC107444150 0
19 LOC107438732 Ptep1.0/2.0 NW_024969622.1 1361500 1374934 + somatomedin-B and thrombospondin type-1 domain-containing protein aug3.g26535 LOC107438732 0
20 LOC122271162 Ptep1.0/2.0 NW_024970611.1 204905 206436 + uncharacterized LOC122271162 aug3.g4696 NA 1e-29
21 LOC107447606 Ptep1.0/2.0 NW_024971237.1 9352 67313 + palmitoleoyl-protein carboxylesterase notum1 aug3.g9270 LOC107447606 0
22 LOC107452952 Ptep1.0/2.0 NW_024971278.1 17914 28385 - uncharacterized LOC107452952 aug3.g10684 LOC107452952 0
23 LOC107436974 Ptep1.0/2.0 NW_024969768.1 64345 87153 - recombination repair protein 1 aug3.g26142 LOC107436974 0
24 LOC107451147 Ptep1.0/2.0 NW_024970368.1 357542 383584 - uncharacterized LOC107451147 aug3.g3821 LOC107451147 0
25 LOC107438258 Ptep1.0/2.0 NW_024970043.1 440705 472295 + uncharacterized protein PB18E9.04c aug3.g12945 LOC107438258 0
26 LOC107442904 Ptep1.0/2.0 NW_024969614.1 2615792 2688033 - telomere-associated protein RIF1 aug3.g9918 LOC107442904 0
27 LOC107446684 Ptep1.0/2.0 NW_024969854.1 809509 856638 - chromodomain-helicase-DNA-binding protein 1 aug3.g1438 LOC107446684 0
28 LOC107455875 Ptep1.0/2.0 NW_024970611.1 182675 204721 + uncharacterized LOC107455875 aug3.g8101 LOC107455875 0
29 LOC107446303 Ptep1.0/2.0 NW_024969606.1 51236 97939 + fat-like cadherin-related tumor suppressor homolog aug3.g7567,aug3.g24695 LOC107446303,LOC110281926 0
30 LOC122269539 Ptep1.0/2.0 NW_024969854.1 797029 807550 - chromodomain-helicase-DNA-binding protein 1-like aug3.g1438 LOC107446684 0
31 LOC107452081 Ptep1.0/2.0 NW_024969596.1 255883 382544 - bromodomain adjacent to zinc finger domain protein 2B aug3.g4504 LOC107452081 0
32 LOC122273752 Ptep1.0/2.0 NW_024979636.1 302 1694 - uncharacterized LOC122273752 aug3.g7369 NA 4e-66
33 LOC107451685 Ptep1.0/2.0 NW_024969853.1 177887 310356 - roundabout homolog 3 aug3.g10604 LOC107451685 0
34 LOC107453499 Ptep1.0/2.0 NW_024969603.1 1608727 1711074 - zinc finger homeobox protein 4 aug3.g25763 LOC107453499 0
35 LOC107449704 Ptep1.0/2.0 NW_024969700.1 1093746 1398733 + semaphorin-2A aug3.g2914 LOC107449704 0
36 LOC107448102 Ptep1.0/2.0 NW_024969616.1 2623035 2688706 - protein polybromo-1 aug3.g20121 LOC107448102 0
37 LOC107439655 Ptep1.0/2.0 NW_024969751.1 1353856 1375367 - metacaspase-2 aug3.g13932 LOC107439655 0
38 LOC107439143 Ptep1.0/2.0 NW_024969888.1 562906 586993 - protein obstructor-E aug3.g13591 LOC107439143 0
39 LOC107449967 Ptep1.0/2.0 NW_024970555.1 209 17386 - DNA replication factor Cdt1 aug3.g21031,aug3.g18596 LOC107449967 0
40 LOC107441296 Ptep1.0/2.0 NW_024970675.1 7109 60947 + abnormal spindle-like microcephaly-associated protein homolog aug3.g15794 LOC107441296 0
41 LOC107446115 Ptep1.0/2.0 NW_024970281.1 10697 82354 - extracellular sulfatase Sulf-1 aug3.g18939 LOC107446115 0
42 LOC107441380 Ptep1.0/2.0 NW_024969770.1 1499361 1504637 + frizzled-4 aug3.g9827 LOC107441380 0
43 LOC107456192 Ptep1.0/2.0 NW_024970389.1 14860 67448 + histone acetyltransferase KAT6B aug3.g8366 LOC107456192 0
44 LOC107441543 Ptep1.0/2.0 NW_024969929.1 241508 328950 - neurotactin aug3.g27319 LOC107441543 0
45 LOC107454259 Ptep1.0/2.0 NW_024969605.1 411780 811495 - protocadherin-like wing polarity protein stan aug3.g15160,aug3.g6142,aug3.g22281 LOC107454259 0
46 LOC107443783 Ptep1.0/2.0 NW_024969706.1 2038945 2314643 - plexin-A2 aug3.g428 LOC107443783 0
47 LOC122268365 Ptep1.0/2.0 NW_024970271.1 423632 436910 - DNA replication factor Cdt1-like aug3.g18596 NA 0
48 LOC107450643 Ptep1.0/2.0 NW_024969599.1 1635524 1654567 - elongation factor Tu, mitochondrial aug3.g3496 LOC107450643 0
49 LOC107457539 Ptep1.0/2.0 NW_024969659.1 595765 831003 + zinc finger homeobox protein 3 aug3.g11268 LOC107457539 0
50 LOC107455926 Ptep1.0/2.0 NW_024970042.1 388356 410479 + atrial natriuretic peptide-converting enzyme aug3.g8160,aug3.g19105 LOC107455926 0
51 LOC107455884 Ptep1.0/2.0 NW_024970211.1 288048 331999 + chromatin assembly factor 1 subunit A aug3.g8117 LOC107455884 0
52 LOC107455328 Ptep1.0/2.0 NW_024970759.1 68145 85741 + translocation protein SEC62 aug3.g7659,aug3.g22208 LOC107455328 0
53 LOC107439423 Ptep1.0/2.0 NW_024969979.1 548327 573049 - S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 aug3.g13764 LOC107439423 0
54 LOC107456527 Ptep1.0/2.0 NW_024969618.1 538235 542148 - zinc finger protein 585A aug3.g25256,aug3.g25257 LOC107456527 0
55 LOC107453510 Ptep1.0/2.0 NW_024970128.1 82795 113461 + uncharacterized LOC107453510 aug3.g23818,aug3.g23819 LOC107453510 0
56 LOC107439406 Ptep1.0/2.0 NW_024969836.1 12654 32271 + CAAX prenyl protease 1 homolog aug3.g13751 LOC107439406 0
57 LOC107452250 Ptep1.0/2.0 NW_024970867.1 5816 161626 + histone-lysine N-methyltransferase 2C aug3.g10650 LOC107452250 0
58 LOC110282023 Ptep1.0/2.0 NW_024969792.1 280119 287570 + histone H1.M6.2 aug3.g10574 LOC110282023 0
59 LOC107450684 Ptep1.0/2.0 NW_024970707.1 191047 207946 - receptor expression-enhancing protein 5 aug3.g3524 LOC107450684 0
60 LOC107438170 Ptep1.0/2.0 NW_024969643.1 472012 489779 + uncharacterized LOC107438170 aug3.g12873 LOC107438170 0
61 LOC107451211 Ptep1.0/2.0 NW_024969611.1 2052284 2349554 - ephrin type-B receptor 2 aug3.g3879 LOC107451211 0
62 LOC107446405 Ptep1.0/2.0 NW_025029440.1 56540 64765 + torsin-1A-interacting protein 2 aug3.g19145 LOC107446405 0
63 LOC107448370 Ptep1.0/2.0 NW_024970018.1 87244 93373 + transmembrane emp24 domain-containing protein 7 aug3.g2175 LOC107448370 0
64 LOC107442502 Ptep1.0/2.0 NW_024970577.1 641695 679377 + E3 ubiquitin-protein ligase TRIP12 aug3.g16621 LOC107442502 0
65 LOC107454519 Ptep1.0/2.0 NW_024969594.1 777239 786951 - protein catecholamines up aug3.g6338 LOC107454519 0
66 LOC107440973 Ptep1.0/2.0 NW_024969663.1 875975 901011 - origin recognition complex subunit 1 aug3.g14908,aug3.g23389 LOC107440973 0
67 LOC107456627 Ptep1.0/2.0 NW_024970536.1 208701 222288 + splicing factor 3B subunit 4 aug3.g8701 LOC107456627 0
68 LOC107453621 Ptep1.0/2.0 NW_024970616.1 17510 28404 - surfeit locus protein 4 homolog aug3.g5627 LOC107453621 0
69 LOC107450661 Ptep1.0/2.0 NW_024970076.1 528474 601609 - homeobox protein Hox-A5 aug3.g15606 LOC107450661 0
70 LOC107456774 Ptep1.0/2.0 NW_024970043.1 203761 211319 + mitochondrial import receptor subunit TOM22 homolog aug3.g8817 LOC107456774 0
71 LOC107449043 Ptep1.0/2.0 NW_024970073.1 285888 290779 + toll-like receptor Tollo aug3.g2549 LOC107449043 0
72 LOC107440207 Ptep1.0/2.0 NW_024969726.1 3258183 3276699 - transmembrane protein 33 aug3.g14350,aug3.g14349,aug3.g23102 LOC107440207 0
73 LOC107446929 Ptep1.0/2.0 NW_024969679.1 845659 848008 - transmembrane protein 209 aug3.g1533 LOC107446929 0
74 LOC107449875 Ptep1.0/2.0 NW_024969609.1 999032 1014778 + sphingolipid delta(4)-desaturase DES1 aug3.g10482 LOC107449875 0
75 LOC107441015 Ptep1.0/2.0 NW_024969678.1 1682673 1688734 - uncharacterized LOC107441015 aug3.g14947 LOC107441015 0
76 LOC107457180 Ptep1.0/2.0 NW_024969714.1 1023351 1149707 - protein jagged-1 aug3.g9162,aug3.g9161 LOC107457180 0
77 LOC107450007 Ptep1.0/2.0 NW_024969877.1 371331 376297 + mitochondrial cardiolipin hydrolase aug3.g3076 LOC107450007 0
78 LOC107447497 Ptep1.0/2.0 NW_024969702.1 770388 810551 + uncharacterized LOC107447497 aug3.g1790 LOC107447497 0
79 LOC107436657 Ptep1.0/2.0 NW_024969705.1 89435 92855 + BAG domain-containing protein Samui aug3.g11738 LOC107436657 0
80 LOC107451660 Ptep1.0/2.0 NW_024970846.1 24518 42153 - vitamin K-dependent protein C aug3.g4198 LOC107451660 0
81 LOC107455364 Ptep1.0/2.0 NW_024970652.1 4941 240353 - syndecan aug3.g25048 LOC107455364 0
81 records were found.(Max.=1000)

References
1) Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis. Front. Cell Dev. Biol. 10:933220.
2) Takanori Akaiwa, Hiroki Oda, Yasuko Akiyama-Oda (2025) Genome-wide quantitative dissection of an arthropod segmented body plan at single-cell resolution Communications Biology 8:913.
[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by hiroki oda, 2025.6.12