Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Dataset ID: sn1_st7 | GeneID(LOC) list: cluster_5


word count=106
Gene/Transcript Records
query No.NCBI geneID (-> UMAP)stage 5lstage 7stage 5lstage 7Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
1 LOC107455689 Ptep1.0/2.0 NW_024969831.1 316795 392166 + homeotic protein proboscipedia aug3.g7953 LOC107455689 0
2 LOC107451942 Ptep1.0/2.0 NW_024970461.1 153699 226970 + protein NDNF aug3.g4413 LOC107451942 0
3 LOC107440711 Ptep1.0/2.0 NW_024969921.1 457405 558369 - homeobox protein Hox-A1 aug3.g27130 LOC107440711 0
4 LOC107438641 Ptep1.0/2.0 NW_024970218.1 160092 282110 + transcription factor Sox-13 aug3.g13250 LOC107438641 0
5 LOC107455686 Ptep1.0/2.0 NW_024969831.1 512171 545973 + homeobox protein Hox-A1-like aug3.g7954 LOC107455686 0
6 LOC107443647 Ptep1.0/2.0 NW_024969633.1 2459596 2538273 + plexin-B aug3.g17369 LOC107443647 0
7 LOC107455688 Ptep1.0/2.0 NW_024969831.1 408849 511729 - uncharacterized LOC107455688 LOC107455688 0
8 LOC107451685 Ptep1.0/2.0 NW_024969853.1 177887 310356 - roundabout homolog 3 aug3.g10604 LOC107451685 0
9 LOC107451579 Ptep1.0/2.0 NW_024970106.1 1155904 1253584 + E3 ubiquitin-protein ligase Rnf220 aug3.g4121 LOC107451579 0
10 LOC107451809 Ptep1.0/2.0 NW_024970104.1 533940 595110 + sonic hedgehog protein-like aug3.g4322 LOC107451809 0
11 LOC107457180 Ptep1.0/2.0 NW_024969714.1 1023351 1149707 - protein jagged-1 aug3.g9162,aug3.g9161 LOC107457180 0
12 LOC107457189 Ptep1.0/2.0 NW_024971022.1 57223 104397 + homeobox protein OTX2-A-like aug3.g9172 LOC107457189 0
13 LOC107448055 Ptep1.0/2.0 NW_024969602.1 294505 421644 - pro-epidermal growth factor aug3.g2047 LOC107448055 0
14 LOC107456525 Ptep1.0/2.0 NW_024969618.1 110060 125331 - delta-like protein 1 aug3.g25248 LOC107456525 0
15 LOC107450899 Ptep1.0/2.0 NW_024969598.1 1524043 1618053 + sal-like protein 1 aug3.g3675 LOC107450899 0
16 LOC107452215 Ptep1.0/2.0 NW_024969686.1 1262457 1410355 - Krueppel-like factor 7 aug3.g4601 LOC107452215 0
17 LOC107440849 Ptep1.0/2.0 NW_024970087.1 158257 195758 - uncharacterized LOC107440849 aug3.g27174 LOC107440849 0
18 LOC122270945 Ptep1.0/2.0 NW_024970465.1 4386 8422 - uncharacterized LOC122270945 aug3.g7118,aug3.g12042 NA 0
19 LOC107446082 Ptep1.0/2.0 NW_024969638.1 239479 381182 + sodium- and chloride-dependent glycine transporter 1 aug3.g1218 LOC107446082 0
20 LOC107450063 Ptep1.0/2.0 NW_024969698.1 603238 707119 + homeobox protein Meis1 aug3.g3111 LOC107450063 0
21 LOC107457313 Ptep1.0/2.0 NW_024969787.1 743818 747270 - transcription factor Sox-2 aug3.g11061 LOC107457313 0
22 LOC107456521 Ptep1.0/2.0 NW_024969618.1 671428 785428 - ephrin-B2a aug3.g25262 LOC107456521 0
23 LOC107440240 Ptep1.0/2.0 NW_024970743.1 104190 175589 - protein patched-like aug3.g14374 LOC107440240 0
24 LOC107436358 Ptep1.0/2.0 NW_024969815.1 644726 725669 + fasciclin-2 aug3.g11491 LOC107436358 0
25 LOC107454275 Ptep1.0/2.0 NW_024969889.1 593567 679750 + transcription factor SOX-4-like aug3.g24008,aug3.g16006 LOC107454275 0
26 LOC107453771 Ptep1.0/2.0 NW_024969727.1 973540 1095466 - SPARC-related modular calcium-binding protein 2 aug3.g5781 LOC107453771 0
27 LOC107444570 Ptep1.0/2.0 NW_024969889.1 781166 854212 - aquaporin-9 aug3.g10061,aug3.g24198 LOC107444570 0
28 LOC107437305 Ptep1.0/2.0 NW_024970197.1 359527 396131 - zinc finger protein ZIC 4-like aug3.g12202 LOC107437305 0
29 LOC107442050 Ptep1.0/2.0 NW_024970088.1 426101 534623 - laminin subunit alpha-1 aug3.g16317 LOC107442050 0
30 LOC107451660 Ptep1.0/2.0 NW_024970846.1 24518 42153 - vitamin K-dependent protein C aug3.g4198 LOC107451660 0
31 LOC107444748 Ptep1.0/2.0 NW_024970651.1 124752 158939 - uncharacterized LOC107444748 aug3.g18068 LOC107444748 0
32 LOC107457517 Ptep1.0/2.0 NW_024971257.1 13855 51591 + G1/S-specific cyclin-D2 aug3.g11246,aug3.g11247 LOC107457517 0
33 LOC107450335 Ptep1.0/2.0 NW_024969819.1 2114835 2277923 + zinc finger protein basonuclin-2 aug3.g3273 LOC107450335 0
34 LOC107437002 Ptep1.0/2.0 NW_024971413.1 64921 188667 + adhesion G protein-coupled receptor L1 aug3.g9493 LOC107437002 0
35 LOC107454167 Ptep1.0/2.0 NW_024995499.1 704 1065 + dorsal-ventral patterning protein Sog-like aug3.g23966 LOC107454167 0
35 LOC107454167_1 Ptep1.0/2.0 NW_024969641.1 594712 690101 + dorsal-ventral patterning protein Sog-like aug3.g23966 LOC107454167 0
36 LOC107451346 Ptep1.0/2.0 NW_024969701.1 587386 878494 - latrophilin Cirl aug3.g25404 LOC107451346 0
37 LOC107451394 Ptep1.0/2.0 NW_024970213.1 343828 437631 - frizzled-5 aug3.g4009 LOC107451394 0
38 LOC107445428 Ptep1.0/2.0 NW_024969822.1 115253 166067 - BMP and activin membrane-bound inhibitor homolog aug3.g18541 LOC107445428 0
39 LOC107447205 Ptep1.0/2.0 NW_024969777.1 156659 277064 - roundabout homolog 1 aug3.g1658 LOC107447205 0
40 LOC107452888 Ptep1.0/2.0 NW_024969945.1 216162 280847 - uncharacterized LOC107452888 aug3.g5060 LOC107452888 0
41 LOC107438011 Ptep1.0/2.0 NW_024969744.1 383869 552126 + neurogenic locus protein delta aug3.g12734 LOC107438011 0
42 LOC122270466 Ptep1.0/2.0 NW_024970197.1 251424 329640 - uncharacterized LOC122270466 aug3.g12205,aug3.g12204 NA 0
43 LOC107438242 Ptep1.0/2.0 NW_024970132.1 546577 625801 - growth arrest-specific protein 2 aug3.g12936 LOC107438242 0
44 LOC107436894 Ptep1.0/2.0 NW_024969612.1 1030321 1221533 + zinc finger protein rotund aug3.g394 LOC107436894 0
45 LOC107447678 Ptep1.0/2.0 NW_024969609.1 2445589 2461432 + homeobox protein MSH-D aug3.g15189 LOC107447678 0
46 LOC107450690 Ptep1.0/2.0 NW_024970489.1 54137 109046 + uncharacterized LOC107450690 aug3.g25707 LOC107450690 0
47 LOC107438277 Ptep1.0/2.0 NW_024969753.1 1097287 1113483 - Krueppel-like factor 5 aug3.g26435 LOC107438277 0
48 LOC107456312 Ptep1.0/2.0 NW_024970889.1 209401 233571 + smoothened homolog aug3.g8490 LOC107456312 0
49 LOC107456864 Ptep1.0/2.0 NW_024969914.1 23567 109354 - exonuclease GOR-like aug3.g18504,aug3.g1256 LOC107456864 0
50 LOC107443758 Ptep1.0/2.0 NW_024969706.1 1741270 1778310 - transcription factor AP-4 aug3.g424 LOC107443758 0
51 LOC107451348 Ptep1.0/2.0 NW_024970681.1 4220 19077 + uncharacterized LOC107451348 LOC107451348 0
52 LOC107438760 Ptep1.0/2.0 NW_024970266.1 3014 35987 + RING finger protein 150 aug3.g13351 LOC107438760 0
53 LOC107441179 Ptep1.0/2.0 NW_024969792.1 550824 620514 + protein grainyhead aug3.g27212,aug3.g23194,aug3.g10582 LOC107441179,LOC107451351 0
54 LOC107436691 Ptep1.0/2.0 NW_024969616.1 2378897 2439753 + uncharacterized LOC107436691 aug3.g11765 LOC107436691 0
55 LOC107439046 Ptep1.0/2.0 NW_024969672.1 778242 1093632 + homeobox protein extradenticle aug3.g13538,aug3.g27748,aug3.g27747 LOC107439046 0
56 LOC107451797 Ptep1.0/2.0 NW_024970409.1 26886 93939 + uncharacterized LOC107451797 aug3.g4304 LOC107451797 0
57 LOC107439669 Ptep1.0/2.0 NW_024971393.1 1669 39371 - histone H3-like centromeric protein cid aug3.g13949,aug3.g13948 LOC107439669 0
58 LOC107438758 Ptep1.0/2.0 NW_024970060.1 453865 533783 - epidermal growth factor receptor aug3.g13345,aug3.g13344 LOC107438758 0
59 LOC107450119 Ptep1.0/2.0 NW_024969786.1 1486843 1546248 + nuclear pore membrane glycoprotein 210 aug3.g3136 LOC107450119 0
60 LOC110281924 Ptep1.0/2.0 NW_024969777.1 469843 612682 + triadin aug3.g6466,aug3.g6465 LOC110281924 0
61 LOC107454179 Ptep1.0/2.0 NW_024969641.1 323500 353007 - delta(14)-sterol reductase TM7SF2 aug3.g23973 LOC107454179 0
62 LOC107436623 Ptep1.0/2.0 NW_024970548.1 149824 183056 - neuronal calcium sensor 1 aug3.g11709 LOC107436623 0
63 LOC107444578 Ptep1.0/2.0 NW_024969761.1 91499 161185 - amphiphysin aug3.g17965,aug3.g17964 LOC107444578 0
64 LOC107449990 Ptep1.0/2.0 NW_024969877.1 413591 451566 - uncharacterized LOC107449990 aug3.g3073 LOC107449990 0
65 LOC107438376 Ptep1.0/2.0 NW_024969657.1 544238 613002 - cadherin-87A aug3.g13039 LOC107438376 0
66 LOC107438732 Ptep1.0/2.0 NW_024969622.1 1361500 1374934 + somatomedin-B and thrombospondin type-1 domain-containing protein aug3.g26535 LOC107438732 0
67 LOC107449610 Ptep1.0/2.0 NW_024969901.1 485284 537309 + tudor domain-containing protein 1 aug3.g2858 LOC107449610 0
68 LOC107449579 Ptep1.0/2.0 NW_024970177.1 205034 336536 + muscle calcium channel subunit alpha-1 aug3.g2843,aug3.g21678 LOC107449579,LOC107452166 0
69 LOC107455850 Ptep1.0/2.0 NW_024970537.1 67033 131929 - transmembrane protein 178B aug3.g8086,aug3.g8085 LOC107455850 0
70 LOC107449379 Ptep1.0/2.0 NW_024969858.1 101945 195113 - regulating synaptic membrane exocytosis protein 2 aug3.g10454 LOC107449379 0
71 LOC107449960 Ptep1.0/2.0 NW_024969794.1 924401 971105 + neuroglian aug3.g3046,aug3.g3047 LOC107449960 0
72 LOC122270171 Ptep1.0/2.0 NW_024970077.1 73419 76544 + uncharacterized LOC122270171 aug3.g20128 NA 3e-91
73 LOC107451800 Ptep1.0/2.0 NW_024969937.1 222149 258792 + carboxy-terminal kinesin 2 aug3.g4311 LOC107451800 0
74 LOC107451335 Ptep1.0/2.0 NW_024970681.1 30507 68091 - fatty acid-binding protein aug3.g3973 LOC107451335 0
75 LOC107441637 Ptep1.0/2.0 NW_024970565.1 31225 80223 + DNA replication licensing factor mcm4-A aug3.g27383 LOC107441637 0
76 LOC107455216 Ptep1.0/2.0 NW_024970426.1 205828 228594 + bestrophin-2 aug3.g6914 LOC107455216 0
77 LOC107451441 Ptep1.0/2.0 NW_024969892.1 818486 854129 - uncharacterized LOC107451441 aug3.g4013 LOC107451441 0
78 LOC107441879 Ptep1.0/2.0 NW_024970245.1 282438 398184 + talin-2 aug3.g16213,aug3.g16214 LOC107441879 0
79 LOC107455884 Ptep1.0/2.0 NW_024970211.1 288048 331999 + chromatin assembly factor 1 subunit A aug3.g8117 LOC107455884 0
80 LOC107439544 Ptep1.0/2.0 NW_024969687.1 2095046 2128457 - kinetochore protein NDC80 homolog aug3.g9675,aug3.g8445 LOC107439544 0
81 LOC107451075 Ptep1.0/2.0 NW_024969768.1 21201 54480 - uncharacterized LOC107451075 aug3.g21386 LOC107451075 0
82 LOC107450126 Ptep1.0/2.0 NW_024970833.1 24806 197601 - ubiquitin carboxyl-terminal hydrolase 34 aug3.g3140,aug3.g3138,aug3.g24193 LOC107441888,LOC107450126 0
83 LOC107451464 Ptep1.0/2.0 NW_024970103.1 528261 530087 + transcription factor HES-4-A-like aug3.g4026 LOC107451464 0
84 LOC107436699 Ptep1.0/2.0 NW_024969864.1 302582 332958 - putative E3 ubiquitin-protein ligase UNKL aug3.g9467 LOC107436699 0
85 LOC107439058 Ptep1.0/2.0 NW_024971146.1 12939 94546 + regulator of G-protein signaling 12 aug3.g26650,aug3.g24025 LOC107439058 0
86 LOC107441203 Ptep1.0/2.0 NW_024969863.1 106711 125793 + potassium voltage-gated channel subfamily B member 2 aug3.g27237 LOC107441203 0
87 LOC107437115 Ptep1.0/2.0 NW_024969780.1 1611276 1705234 - one cut domain family member 2 aug3.g26177 LOC107437115 0
88 LOC107453143 Ptep1.0/2.0 NW_024969836.1 1293520 1359043 + steroid hormone receptor ERR2 aug3.g5251 LOC107453143 0
89 LOC107456885 Ptep1.0/2.0 NW_024969920.1 334944 427608 + sodium-dependent phosphate transporter 1 aug3.g25832 LOC107456885 0
90 LOC107436169 Ptep1.0/2.0 NW_024970896.1 32517 57476 + uncharacterized LOC107436169 aug3.g20047,aug3.g11351 LOC107436169 0
91 LOC107450601 Ptep1.0/2.0 NW_024969913.1 90916 162015 + uncharacterized LOC107450601 aug3.g3466,aug3.g3467,aug3.g25011 LOC107450601 0
92 LOC107453018 Ptep1.0/2.0 NW_024969955.1 10508 110640 - nuclear pore complex protein Nup205 aug3.g5146,aug3.g22142 LOC107453018,LOC107453017 0
93 LOC107448452 Ptep1.0/2.0 NW_024969636.1 887496 902068 + nucleoporin NDC1 aug3.g2237 LOC107448452 0
94 LOC107440093 Ptep1.0/2.0 NW_024971605.1 27556 50954 + protein zwilch homolog aug3.g26977 LOC107440093 0
95 LOC107447080 Ptep1.0/2.0 NW_024969639.1 1459932 1477555 - angiomotin aug3.g19537 LOC107447080 0
96 LOC122272805 Ptep1.0/2.0 NW_024972888.1 12630 18437 - uncharacterized LOC122272805 aug3.g11583,aug3.g19779,aug3.g2113 NA 0
97 LOC107454956 Ptep1.0/2.0 NW_024969750.1 902344 939877 + uncharacterized LOC107454956 aug3.g24974 LOC107454956 0
98 LOC107446210 Ptep1.0/2.0 NW_024969725.1 42977 133629 + zinc transporter ZIP6 aug3.g1267 LOC107446210 0
99 LOC107453597 Ptep1.0/2.0 NW_024969905.1 484247 573318 + fibroblast growth factor 8 aug3.g5611 LOC107453597 0
100 LOC107448326 Ptep1.0/2.0 NW_024970714.1 147540 189011 + E3 ubiquitin-protein ligase UHRF1 aug3.g15310 LOC107448326 0
101 LOC107455082 Ptep1.0/2.0 NW_024969651.1 1558495 1615148 + ethanolaminephosphotransferase 1 aug3.g24993 LOC107455082 0
102 LOC107451030 Ptep1.0/2.0 NW_024969755.1 393287 429793 - proton channel OtopLc aug3.g211 LOC107451030 0
103 LOC107445694 Ptep1.0/2.0 NW_024969911.1 448052 571614 + unconventional myosin-Vb aug3.g9254,aug3.g6148,aug3.g21618 LOC107445694 0
104 LOC107452997 Ptep1.0/2.0 NW_024970787.1 177525 279012 + F-box/WD repeat-containing protein 1A aug3.g5127 LOC107452997 0
105 LOC107445055 Ptep1.0/2.0 NW_024969998.1 596833 616457 - proteoglycan Cow aug3.g7488,aug3.g7489 LOC107445055 0
106 LOC107439742 Ptep1.0/2.0 NW_024969918.1 756382 857639 + phosphatidylinositol 3-kinase regulatory subunit alpha aug3.g26883 LOC107439742 0
107 records were found.(Max.=1000)

References
1) Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis. Front. Cell Dev. Biol. 10:933220.
2) Takanori Akaiwa, Hiroki Oda, Yasuko Akiyama-Oda (2025) Genome-wide quantitative dissection of an arthropod segmented body plan at single-cell resolution Communications Biology 8:913.
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Last updated by hiroki oda, 2025.6.12