Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Dataset ID: sn1_st7 | GeneID(LOC) list: cluster_6


word count=123
Gene/Transcript Records
query No.NCBI geneID (-> UMAP)stage 5lstage 7stage 5lstage 7Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
1 LOC107439785 Ptep1.0/2.0 NW_024970518.1 45428 66827 + homeobox protein engrailed aug3.g14050 LOC107439785 0
2 LOC107448559 Ptep1.0/2.0 NW_024969842.1 334364 356046 + homeobox protein EMX1 aug3.g2295 LOC107448559 0
3 LOC107448560 Ptep1.0/2.0 NW_024969842.1 233751 248172 + homeobox protein EMX2 aug3.g2297 LOC107448560 0
4 LOC107437266 Ptep1.0/2.0 NW_024969907.1 377395 420801 + homeobox protein EMX1 aug3.g26211 LOC107437266 0
5 LOC107457189 Ptep1.0/2.0 NW_024971022.1 57223 104397 + homeobox protein OTX2-A-like aug3.g9172 LOC107457189 0
6 LOC107437265 Ptep1.0/2.0 NW_024969907.1 686982 763101 + homeobox protein EMX2 aug3.g26210 LOC107437265 0
7 LOC107449891 Ptep1.0/2.0 NW_024969609.1 1201326 1414848 - LIM/homeobox protein Lhx5 aug3.g10485 LOC107449891 0
8 LOC107441893 Ptep1.0/2.0 NW_024969823.1 1717036 1803416 - paired box protein Pax-6 aug3.g19451,aug3.g24194,aug3.g22155,aug3.g19881 LOC107446875,LOC107447639,LOC107441893 0
9 LOC107436783 Ptep1.0/2.0 NW_024969630.1 1302929 1514406 - teneurin-m aug3.g11824,aug3.g22153,aug3.g11825 LOC107436783,LOC107454543 0
10 LOC107454275 Ptep1.0/2.0 NW_024969889.1 593567 679750 + transcription factor SOX-4-like aug3.g24008,aug3.g16006 LOC107454275 0
11 LOC122270466 Ptep1.0/2.0 NW_024970197.1 251424 329640 - uncharacterized LOC122270466 aug3.g12205,aug3.g12204 NA 0
12 LOC107438084 Ptep1.0/2.0 NW_024970334.1 37561 142151 - pro-neuregulin-2, membrane-bound isoform aug3.g12807 LOC107438084 0
13 LOC107451809 Ptep1.0/2.0 NW_024970104.1 533940 595110 + sonic hedgehog protein-like aug3.g4322 LOC107451809 0
14 LOC107437305 Ptep1.0/2.0 NW_024970197.1 359527 396131 - zinc finger protein ZIC 4-like aug3.g12202 LOC107437305 0
15 LOC107457313 Ptep1.0/2.0 NW_024969787.1 743818 747270 - transcription factor Sox-2 aug3.g11061 LOC107457313 0
16 LOC107457180 Ptep1.0/2.0 NW_024969714.1 1023351 1149707 - protein jagged-1 aug3.g9162,aug3.g9161 LOC107457180 0
17 LOC107447180 Ptep1.0/2.0 NW_024969738.1 599279 704963 + protein Wnt-5b-like aug3.g1632 LOC107447180 0
18 LOC107436595 Ptep1.0/2.0 NW_024969823.1 1344184 1450650 + paired box protein Pax-6 aug3.g11688 LOC107436595 0
19 LOC107451942 Ptep1.0/2.0 NW_024970461.1 153699 226970 + protein NDNF aug3.g4413 LOC107451942 0
20 LOC107457243 Ptep1.0/2.0 NW_024969909.1 110141 237797 - protein Wnt-16-like aug3.g11009 LOC107457243 0
21 LOC107440157 Ptep1.0/2.0 NW_024970490.1 4863 141355 + zinc finger protein 423 aug3.g14296 LOC107440157 0
22 LOC107440240 Ptep1.0/2.0 NW_024970743.1 104190 175589 - protein patched-like aug3.g14374 LOC107440240 0
23 LOC107457564 Ptep1.0/2.0 NW_024970001.1 631432 721682 - homeobox protein OTX2 aug3.g25936 LOC107457564 0
24 LOC107454167 Ptep1.0/2.0 NW_024995499.1 704 1065 + dorsal-ventral patterning protein Sog-like aug3.g23966 LOC107454167 0
24 LOC107454167_1 Ptep1.0/2.0 NW_024969641.1 594712 690101 + dorsal-ventral patterning protein Sog-like aug3.g23966 LOC107454167 0
25 LOC107453701 Ptep1.0/2.0 NW_024969823.1 55411 148082 + matrix metalloproteinase-21 aug3.g5702 LOC107453701 0
26 LOC107436358 Ptep1.0/2.0 NW_024969815.1 644726 725669 + fasciclin-2 aug3.g11491 LOC107436358 0
27 LOC107456312 Ptep1.0/2.0 NW_024970889.1 209401 233571 + smoothened homolog aug3.g8490 LOC107456312 0
28 LOC107442925 Ptep1.0/2.0 NW_024970173.1 410777 473979 + bone morphogenetic protein 4-like aug3.g16926 LOC107442925 0
29 LOC107452888 Ptep1.0/2.0 NW_024969945.1 216162 280847 - uncharacterized LOC107452888 aug3.g5060 LOC107452888 0
30 LOC107436691 Ptep1.0/2.0 NW_024969616.1 2378897 2439753 + uncharacterized LOC107436691 aug3.g11765 LOC107436691 0
31 LOC107448055 Ptep1.0/2.0 NW_024969602.1 294505 421644 - pro-epidermal growth factor aug3.g2047 LOC107448055 0
32 LOC107447162 Ptep1.0/2.0 NW_024970416.1 126814 139358 - protein C-ets-1 aug3.g19580 LOC107447162 0
33 LOC107453771 Ptep1.0/2.0 NW_024969727.1 973540 1095466 - SPARC-related modular calcium-binding protein 2 aug3.g5781 LOC107453771 0
34 LOC107439303 Ptep1.0/2.0 NW_024969993.1 200669 276532 + hemicentin-2 aug3.g13686 LOC107439303 0
35 LOC107449611 Ptep1.0/2.0 NW_024969901.1 310205 442919 - protein dachsous aug3.g2859 LOC107449611 0
36 LOC107453597 Ptep1.0/2.0 NW_024969905.1 484247 573318 + fibroblast growth factor 8 aug3.g5611 LOC107453597 0
37 LOC107444744 Ptep1.0/2.0 NW_024969596.1 1108746 1179192 - transcription factor SOX-8 aug3.g816 LOC107444744 0
38 LOC107447307 Ptep1.0/2.0 NW_024971214.1 14262 18868 + uncharacterized LOC107447307 aug3.g21167 LOC107447307 0
39 LOC107450899 Ptep1.0/2.0 NW_024969598.1 1524043 1618053 + sal-like protein 1 aug3.g3675 LOC107450899 0
40 LOC107438641 Ptep1.0/2.0 NW_024970218.1 160092 282110 + transcription factor Sox-13 aug3.g13250 LOC107438641 0
41 LOC107446074 Ptep1.0/2.0 NW_024969638.1 486050 647375 - glypican-5 aug3.g1222 LOC107446074 0
42 LOC107449847 Ptep1.0/2.0 NW_024971238.1 50621 62806 - transcription factor HES-7.1 aug3.g20968 LOC107449847 0
43 LOC107452215 Ptep1.0/2.0 NW_024969686.1 1262457 1410355 - Krueppel-like factor 7 aug3.g4601 LOC107452215 0
44 LOC107444748 Ptep1.0/2.0 NW_024970651.1 124752 158939 - uncharacterized LOC107444748 aug3.g18068 LOC107444748 0
45 LOC107438948 Ptep1.0/2.0 NW_024969835.1 314230 529731 + rhomboid-related protein 2 aug3.g13482 LOC107438948 0
46 LOC107437748 Ptep1.0/2.0 NW_024969659.1 2396380 2411412 - adipolin aug3.g12543 LOC107437748 0
47 LOC107457517 Ptep1.0/2.0 NW_024971257.1 13855 51591 + G1/S-specific cyclin-D2 aug3.g11246,aug3.g11247 LOC107457517 0
48 LOC107456521 Ptep1.0/2.0 NW_024969618.1 671428 785428 - ephrin-B2a aug3.g25262 LOC107456521 0
49 LOC107444455 Ptep1.0/2.0 NW_024969675.1 464607 632665 - uncharacterized LOC107444455 aug3.g17881,aug3.g17882 LOC107444455 0
50 LOC107438376 Ptep1.0/2.0 NW_024969657.1 544238 613002 - cadherin-87A aug3.g13039 LOC107438376 0
51 LOC107441868 Ptep1.0/2.0 NW_024970214.1 219176 476989 + uncharacterized LOC107441868 aug3.g27457,aug3.g10400 LOC107441868 0
52 LOC107445428 Ptep1.0/2.0 NW_024969822.1 115253 166067 - BMP and activin membrane-bound inhibitor homolog aug3.g18541 LOC107445428 0
53 LOC107451332 Ptep1.0/2.0 NW_024970574.1 30477 76012 + uncharacterized LOC107451332 aug3.g3963,aug3.g15729 LOC110283199,LOC107451332 0
54 LOC107443911 Ptep1.0/2.0 NW_024970165.1 417009 611387 + plexin-B aug3.g573 LOC107443911 0
55 LOC107441406 Ptep1.0/2.0 NW_024971166.1 58212 95218 + uncharacterized LOC107441406 aug3.g27275 LOC107441406 0
56 LOC107437937 Ptep1.0/2.0 NW_024970240.1 435276 445076 - zinc finger protein Noc aug3.g12685,aug3.g23139 LOC107437937 0
57 LOC107437956 Ptep1.0/2.0 NW_024969693.1 370222 464462 + semaphorin-5A aug3.g26377 LOC107437956 0
58 LOC107450690 Ptep1.0/2.0 NW_024970489.1 54137 109046 + uncharacterized LOC107450690 aug3.g25707 LOC107450690 0
59 LOC107453922 Ptep1.0/2.0 NW_024969687.1 966537 1002694 + four-jointed box protein 1 aug3.g5891 LOC107453922 0
60 LOC107438242 Ptep1.0/2.0 NW_024970132.1 546577 625801 - growth arrest-specific protein 2 aug3.g12936 LOC107438242 0
61 LOC107444844 Ptep1.0/2.0 NW_024969601.1 520078 548512 - protein giant-lens aug3.g839 LOC107444844 0
62 LOC107445612 Ptep1.0/2.0 NW_024970201.1 134094 367926 + neurobeachin aug3.g12182,aug3.g24475,aug3.g18642,aug3.g24905 LOC107445612,LOC107446264 0
63 LOC107443696 Ptep1.0/2.0 NW_024970028.1 222440 238717 + protein snail homolog Sna aug3.g416,aug3.g417 LOC107443696 0
64 LOC107446082 Ptep1.0/2.0 NW_024969638.1 239479 381182 + sodium- and chloride-dependent glycine transporter 1 aug3.g1218 LOC107446082 0
65 LOC107455759 Ptep1.0/2.0 NW_024969627.1 1358733 1375940 + meteorin-like protein aug3.g8000 LOC107455759 0
66 LOC107445627 Ptep1.0/2.0 NW_024969645.1 618873 712055 - uncharacterized LOC107445627 aug3.g1111,aug3.g21915 LOC110282090,LOC107445627 0
67 LOC107454179 Ptep1.0/2.0 NW_024969641.1 323500 353007 - delta(14)-sterol reductase TM7SF2 aug3.g23973 LOC107454179 0
68 LOC107450121 Ptep1.0/2.0 NW_024970448.1 310544 388521 + CD9 antigen aug3.g10506 LOC107450121 0
69 LOC107444570 Ptep1.0/2.0 NW_024969889.1 781166 854212 - aquaporin-9 aug3.g10061,aug3.g24198 LOC107444570 0
70 LOC107444665 Ptep1.0/2.0 NW_024970315.1 268279 295533 + nuclear receptor subfamily 2 group E member 1 aug3.g794 LOC107444665 0
71 LOC107443364 Ptep1.0/2.0 NW_024970254.1 5297 27059 + uncharacterized LOC107443364 aug3.g17172 LOC107443364 0
72 LOC107436350 Ptep1.0/2.0 NW_024970327.1 158464 317416 + glypican-6 aug3.g11833,aug3.g11486 LOC107436350 0
73 LOC107438277 Ptep1.0/2.0 NW_024969753.1 1097287 1113483 - Krueppel-like factor 5 aug3.g26435 LOC107438277 0
74 LOC107436424 Ptep1.0/2.0 NW_024969608.1 909898 1100900 - plasma membrane calcium-transporting ATPase 1 aug3.g11553 LOC107436424 0
75 LOC107451348 Ptep1.0/2.0 NW_024970681.1 4220 19077 + uncharacterized LOC107451348 LOC107451348 0
76 LOC107456830 Ptep1.0/2.0 NW_024969653.1 33896 90683 - serine-rich adhesin for platelets aug3.g8856 LOC107456830 0
77 LOC107456885 Ptep1.0/2.0 NW_024969920.1 334944 427608 + sodium-dependent phosphate transporter 1 aug3.g25832 LOC107456885 0
78 LOC107436108 Ptep1.0/2.0 NW_024969622.1 155305 180417 + ankyrin repeat domain-containing protein 10 aug3.g11322 LOC107436108 0
79 LOC107439350 Ptep1.0/2.0 NW_024970014.1 656227 670634 + protein 60A aug3.g13706 LOC107439350 0
80 LOC122272805 Ptep1.0/2.0 NW_024972888.1 12630 18437 - uncharacterized LOC122272805 aug3.g11583,aug3.g19779,aug3.g2113 NA 0
81 LOC107453618 Ptep1.0/2.0 NW_024970067.1 469826 583294 - protein crumbs aug3.g5630 LOC107453618 0
82 LOC107441179 Ptep1.0/2.0 NW_024969792.1 550824 620514 + protein grainyhead aug3.g27212,aug3.g23194,aug3.g10582 LOC107441179,LOC107451351 0
83 LOC107451145 Ptep1.0/2.0 NW_024970368.1 174561 221216 - alpha-aminoadipic semialdehyde synthase, mitochondrial aug3.g3825 LOC107451145 0
84 LOC107439672 Ptep1.0/2.0 NW_024972112.1 142331 148829 - serine/threonine-protein kinase pim-3 aug3.g13957 LOC107439672 0
85 LOC107445694 Ptep1.0/2.0 NW_024969911.1 448052 571614 + unconventional myosin-Vb aug3.g9254,aug3.g6148,aug3.g21618 LOC107445694 0
86 LOC107451800 Ptep1.0/2.0 NW_024969937.1 222149 258792 + carboxy-terminal kinesin 2 aug3.g4311 LOC107451800 0
87 LOC107451237 Ptep1.0/2.0 NW_024969845.1 744411 800126 - mutS protein homolog 5 aug3.g15685 LOC107451237 0
88 LOC107454790 Ptep1.0/2.0 NW_024969667.1 972409 1099167 + uncharacterized LOC107454790 aug3.g6537,aug3.g6539 LOC107454790 0
89 LOC107440849 Ptep1.0/2.0 NW_024970087.1 158257 195758 - uncharacterized LOC107440849 aug3.g27174 LOC107440849 0
90 LOC107442031 Ptep1.0/2.0 NW_024971147.1 4113 55116 - KH homology domain-containing protein 4 aug3.g16300 LOC107442031 0
91 LOC107450241 Ptep1.0/2.0 NW_024969936.1 525993 538804 + uncharacterized LOC107450241 aug3.g3208 LOC107450241 0
92 LOC107456864 Ptep1.0/2.0 NW_024969914.1 23567 109354 - exonuclease GOR-like aug3.g18504,aug3.g1256 LOC107456864 0
93 LOC107441610 Ptep1.0/2.0 NW_024969627.1 427871 443673 + H/ACA ribonucleoprotein complex non-core subunit NAF1 aug3.g9840,aug3.g20661 LOC107445544,LOC107441610 0
94 LOC107457539 Ptep1.0/2.0 NW_024969659.1 595765 831003 + zinc finger homeobox protein 3 aug3.g11268 LOC107457539 0
95 LOC107438760 Ptep1.0/2.0 NW_024970266.1 3014 35987 + RING finger protein 150 aug3.g13351 LOC107438760 0
96 LOC107440424 Ptep1.0/2.0 NW_024970337.1 44274 244532 + CCR4-NOT transcription complex subunit 6-like aug3.g27048 LOC107440424 0
97 LOC107440431 Ptep1.0/2.0 NW_024970875.1 125639 146493 + SEC14-like protein 2 aug3.g27058 LOC107440431 0
98 LOC107455884 Ptep1.0/2.0 NW_024970211.1 288048 331999 + chromatin assembly factor 1 subunit A aug3.g8117 LOC107455884 0
99 LOC107446576 Ptep1.0/2.0 NW_024971091.1 213944 286699 + golgin subfamily A member 4 aug3.g17030,aug3.g19285 LOC107446576,LOC107443066 0
100 LOC107456260 Ptep1.0/2.0 NW_024969794.1 1190038 1210678 + uncharacterized LOC107456260 aug3.g8434 LOC107456260 0
101 LOC107443758 Ptep1.0/2.0 NW_024969706.1 1741270 1778310 - transcription factor AP-4 aug3.g424 LOC107443758 0
102 LOC107440719 Ptep1.0/2.0 NW_024969901.1 1307854 1549906 + disks large 1 tumor suppressor protein aug3.g14770,aug3.g15874,aug3.g21064 LOC107440719,LOC107441392 0
103 LOC107454693 Ptep1.0/2.0 NW_024970788.1 3922 65247 + retinoblastoma-like protein 1 aug3.g6461 LOC107454693 0
104 LOC107445423 Ptep1.0/2.0 NW_024969611.1 1452583 1474146 - serine/threonine-protein kinase Chk1 aug3.g18535 LOC107445423 0
105 LOC107436699 Ptep1.0/2.0 NW_024969864.1 302582 332958 - putative E3 ubiquitin-protein ligase UNKL aug3.g9467 LOC107436699 0
106 LOC107441203 Ptep1.0/2.0 NW_024969863.1 106711 125793 + potassium voltage-gated channel subfamily B member 2 aug3.g27237 LOC107441203 0
107 LOC107454332 Ptep1.0/2.0 NW_024969746.1 165432 191434 + rac GTPase-activating protein 1 aug3.g6192 LOC107454332 0
108 LOC107449579 Ptep1.0/2.0 NW_024970177.1 205034 336536 + muscle calcium channel subunit alpha-1 aug3.g2843,aug3.g21678 LOC107449579,LOC107452166 0
109 LOC107443876 Ptep1.0/2.0 NW_024969903.1 27759 57703 + ribonucleoside-diphosphate reductase large subunit aug3.g562,aug3.g22848,aug3.g561 LOC107443876,LOC110283384 0
110 LOC107437977 Ptep1.0/2.0 NW_024970524.1 320289 344322 + elongation of very long chain fatty acids protein AAEL008004 aug3.g12709 LOC107437977 0
111 LOC107447080 Ptep1.0/2.0 NW_024969639.1 1459932 1477555 - angiomotin aug3.g19537 LOC107447080 0
112 LOC122272925 Ptep1.0/2.0 NW_024973327.1 1493 5486 - uncharacterized LOC122272925 aug3.g17870 NA 0.0000006
113 LOC107437245 Ptep1.0/2.0 NW_024970443.1 15534 173574 + protein PALS1 aug3.g12145 LOC107437245 0
114 LOC107444578 Ptep1.0/2.0 NW_024969761.1 91499 161185 - amphiphysin aug3.g17965,aug3.g17964 LOC107444578 0
115 LOC107444549 Ptep1.0/2.0 NW_024970398.1 166487 187064 + uncharacterized LOC107444549 aug3.g10057 LOC107444549 0
116 LOC107450126 Ptep1.0/2.0 NW_024970833.1 24806 197601 - ubiquitin carboxyl-terminal hydrolase 34 aug3.g3140,aug3.g3138,aug3.g24193 LOC107441888,LOC107450126 0
117 LOC107455735 Ptep1.0/2.0 NW_024971535.1 11384 79815 + protein DENND6A aug3.g25121 LOC107455735 0
118 LOC107438424 Ptep1.0/2.0 NW_024969843.1 707196 752282 - acyl-CoA-binding domain-containing protein 5 aug3.g26488 LOC107438424 0
119 LOC107451030 Ptep1.0/2.0 NW_024969755.1 393287 429793 - proton channel OtopLc aug3.g211 LOC107451030 0
120 LOC107451599 Ptep1.0/2.0 NW_024971159.1 130019 193070 + ATP-binding cassette sub-family C member 8 aug3.g4149,aug3.g20065 LOC107451599 0
121 LOC107440829 Ptep1.0/2.0 NW_024970964.1 47540 143672 - uncharacterized protein CG43867 aug3.g14846 LOC107440829 0
122 LOC107447405 Ptep1.0/2.0 NW_024970705.1 180384 257484 + exportin-2 aug3.g15179 LOC107447405 0
123 LOC107451510 Ptep1.0/2.0 NW_024969916.1 571912 643877 + transmembrane protein 87A aug3.g4074 LOC107451510 0
124 records were found.(Max.=1000)

References
1) Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis. Front. Cell Dev. Biol. 10:933220.
2) Takanori Akaiwa, Hiroki Oda, Yasuko Akiyama-Oda (2025) Genome-wide quantitative dissection of an arthropod segmented body plan at single-cell resolution Communications Biology 8:913.
[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by hiroki oda, 2025.6.12