Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Dataset ID: sn1_st7 | GeneID(LOC) list: cluster_8


word count=108
Gene/Transcript Records
query No.NCBI geneID (-> UMAP)stage 5lstage 7stage 5lstage 7Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
1 LOC122268913 Ptep1.0/2.0 NW_024969702.1 713233 766174 + uncharacterized LOC122268913 aug3.g1790 LOC107447497 1e-30
2 LOC107444558 Ptep1.0/2.0 NW_024969661.1 1338004 1430226 - paired box protein Pax-5 aug3.g762 LOC107444558 0
3 LOC107447497 Ptep1.0/2.0 NW_024969702.1 770388 810551 + uncharacterized LOC107447497 aug3.g1790 LOC107447497 0
4 LOC107451579 Ptep1.0/2.0 NW_024970106.1 1155904 1253584 + E3 ubiquitin-protein ligase Rnf220 aug3.g4121 LOC107451579 0
5 LOC107442208 Ptep1.0/2.0 NW_024969650.1 716694 755392 + protein shifted aug3.g27568 LOC107442208 0
6 LOC107442769 Ptep1.0/2.0 NW_024969672.1 162686 290950 - neurogenic locus Notch protein aug3.g27737,aug3.g21218 LOC107442769 0
7 LOC107451211 Ptep1.0/2.0 NW_024969611.1 2052284 2349554 - ephrin type-B receptor 2 aug3.g3879 LOC107451211 0
8 LOC107450357 Ptep1.0/2.0 NW_024969725.1 527726 648489 - uncharacterized LOC107450357 aug3.g3277 LOC107450357 0
9 LOC107447606 Ptep1.0/2.0 NW_024971237.1 9352 67313 + palmitoleoyl-protein carboxylesterase notum1 aug3.g9270 LOC107447606 0
10 LOC107437755 Ptep1.0/2.0 NW_024971438.1 15552 47510 + cytochrome P450 3A8 aug3.g12552 LOC107437755 0
11 LOC107444068 Ptep1.0/2.0 NW_024969885.1 708750 778915 + serine-rich adhesin for platelets aug3.g10014,aug3.g22916 LOC107444068 0
12 LOC107448645 Ptep1.0/2.0 NW_024969804.1 48527 119773 - transcription factor Sp9 aug3.g2333 LOC107448645 0
13 LOC107438015 Ptep1.0/2.0 NW_024970324.1 150825 183689 - growth arrest-specific protein 1 aug3.g9575 LOC107438015 0
14 LOC107441380 Ptep1.0/2.0 NW_024969770.1 1499361 1504637 + frizzled-4 aug3.g9827 LOC107441380 0
15 LOC107451346 Ptep1.0/2.0 NW_024969701.1 587386 878494 - latrophilin Cirl aug3.g25404 LOC107451346 0
16 LOC107447678 Ptep1.0/2.0 NW_024969609.1 2445589 2461432 + homeobox protein MSH-D aug3.g15189 LOC107447678 0
17 LOC107454760 Ptep1.0/2.0 NW_024969730.1 633181 756431 - ankyrin repeat domain-containing protein 6 aug3.g24117 LOC107454760 0
18 LOC107450063 Ptep1.0/2.0 NW_024969698.1 603238 707119 + homeobox protein Meis1 aug3.g3111 LOC107450063 0
19 LOC107436691 Ptep1.0/2.0 NW_024969616.1 2378897 2439753 + uncharacterized LOC107436691 aug3.g11765 LOC107436691 0
20 LOC107447507 Ptep1.0/2.0 NW_024969702.1 530177 590436 - homeobox protein Hox-A5 aug3.g17640 LOC107447507 8e-149
21 LOC107446115 Ptep1.0/2.0 NW_024970281.1 10697 82354 - extracellular sulfatase Sulf-1 aug3.g18939 LOC107446115 0
22 LOC107438732 Ptep1.0/2.0 NW_024969622.1 1361500 1374934 + somatomedin-B and thrombospondin type-1 domain-containing protein aug3.g26535 LOC107438732 0
23 LOC107439143 Ptep1.0/2.0 NW_024969888.1 562906 586993 - protein obstructor-E aug3.g13591 LOC107439143 0
24 LOC107438772 Ptep1.0/2.0 NW_024969711.1 282269 830582 + POU domain, class 2, transcription factor 3 aug3.g13364 LOC107438772 0
25 LOC107456088 Ptep1.0/2.0 NW_024971649.1 3049 50280 + iroquois-class homeodomain protein IRX-6 aug3.g8295 LOC107456088 0
26 LOC122269480 Ptep1.0/2.0 NW_024969831.1 109947 150451 - uncharacterized LOC122269480 NA 0
27 LOC107445973 Ptep1.0/2.0 NW_024969716.1 877125 894039 + uncharacterized LOC107445973 aug3.g18851 LOC107445973 0
28 LOC107436358 Ptep1.0/2.0 NW_024969815.1 644726 725669 + fasciclin-2 aug3.g11491 LOC107436358 0
29 LOC107436350 Ptep1.0/2.0 NW_024970327.1 158464 317416 + glypican-6 aug3.g11833,aug3.g11486 LOC107436350 0
30 LOC107454167 Ptep1.0/2.0 NW_024995499.1 704 1065 + dorsal-ventral patterning protein Sog-like aug3.g23966 LOC107454167 0
30 LOC107454167_1 Ptep1.0/2.0 NW_024969641.1 594712 690101 + dorsal-ventral patterning protein Sog-like aug3.g23966 LOC107454167 0
31 LOC107442927 Ptep1.0/2.0 NW_024971052.1 33401 43140 + uncharacterized LOC107442927 LOC107442927 0
32 LOC107451394 Ptep1.0/2.0 NW_024970213.1 343828 437631 - frizzled-5 aug3.g4009 LOC107451394 0
33 LOC107457357 Ptep1.0/2.0 NW_024969595.1 852934 1109016 - tyrosine-protein kinase RYK aug3.g25882 LOC107457357 0
34 LOC107441868 Ptep1.0/2.0 NW_024970214.1 219176 476989 + uncharacterized LOC107441868 aug3.g27457,aug3.g10400 LOC107441868 0
35 LOC107453597 Ptep1.0/2.0 NW_024969905.1 484247 573318 + fibroblast growth factor 8 aug3.g5611 LOC107453597 0
36 LOC107453559 Ptep1.0/2.0 NW_024970641.1 261643 275007 - uncharacterized LOC107453559 aug3.g5569 LOC107453559 0
37 LOC107439034 Ptep1.0/2.0 NW_024971668.1 13841 42087 - methionyl-tRNA formyltransferase, mitochondrial aug3.g13525 LOC107439034 0
38 LOC110281924 Ptep1.0/2.0 NW_024969777.1 469843 612682 + triadin aug3.g6466,aug3.g6465 LOC110281924 0
39 LOC107438948 Ptep1.0/2.0 NW_024969835.1 314230 529731 + rhomboid-related protein 2 aug3.g13482 LOC107438948 0
40 LOC107438760 Ptep1.0/2.0 NW_024970266.1 3014 35987 + RING finger protein 150 aug3.g13351 LOC107438760 0
41 LOC107438714 Ptep1.0/2.0 NW_024970015.1 652540 747387 + transcriptional activator cubitus interruptus-like aug3.g13321 LOC107438714 0
42 LOC107449746 Ptep1.0/2.0 NW_024970266.1 230577 312246 - nuclear receptor subfamily 2 group F member 1-A aug3.g2915 LOC107449746 0
43 LOC107449847 Ptep1.0/2.0 NW_024971238.1 50621 62806 - transcription factor HES-7.1 aug3.g20968 LOC107449847 0
44 LOC107440619 Ptep1.0/2.0 NW_024970318.1 289854 377527 - ETS domain-containing protein Elk-1 aug3.g9766 LOC107440619 0
45 LOC107440157 Ptep1.0/2.0 NW_024970490.1 4863 141355 + zinc finger protein 423 aug3.g14296 LOC107440157 0
46 LOC107446082 Ptep1.0/2.0 NW_024969638.1 239479 381182 + sodium- and chloride-dependent glycine transporter 1 aug3.g1218 LOC107446082 0
47 LOC107456864 Ptep1.0/2.0 NW_024969914.1 23567 109354 - exonuclease GOR-like aug3.g18504,aug3.g1256 LOC107456864 0
48 LOC107441035 Ptep1.0/2.0 NW_024970453.1 72509 141434 + connectin aug3.g27196,aug3.g27195 LOC107441035 0
49 LOC107443946 Ptep1.0/2.0 NW_024970769.1 73366 90135 + extracellular serine/threonine protein kinase four-jointed-like aug3.g581 LOC107443946 0
50 LOC107443364 Ptep1.0/2.0 NW_024970254.1 5297 27059 + uncharacterized LOC107443364 aug3.g17172 LOC107443364 0
51 LOC107437450 Ptep1.0/2.0 NW_024970351.1 290 56568 - cell adhesion molecule-related/down-regulated by oncogenes aug3.g12323 LOC107437450 0
52 LOC107440583 Ptep1.0/2.0 NW_024969814.1 788428 875504 + uncharacterized LOC107440583 aug3.g14659 LOC107440583 0
53 LOC107441688 Ptep1.0/2.0 NW_024969976.1 310836 354704 - recombining binding protein suppressor of hairless aug3.g27389 LOC107441688 0
54 LOC107453499 Ptep1.0/2.0 NW_024969603.1 1608727 1711074 - zinc finger homeobox protein 4 aug3.g25763 LOC107453499 0
55 LOC107453931 Ptep1.0/2.0 NW_024970294.1 288685 323887 + uncharacterized LOC107453931 aug3.g304 LOC107453931 0
56 LOC107448788 Ptep1.0/2.0 NW_024970148.1 124599 283805 + uncharacterized LOC107448788 aug3.g2414,aug3.g2415 LOC107448788 0
57 LOC107443696 Ptep1.0/2.0 NW_024970028.1 222440 238717 + protein snail homolog Sna aug3.g416,aug3.g417 LOC107443696 0
58 LOC107436894 Ptep1.0/2.0 NW_024969612.1 1030321 1221533 + zinc finger protein rotund aug3.g394 LOC107436894 0
59 LOC107451660 Ptep1.0/2.0 NW_024970846.1 24518 42153 - vitamin K-dependent protein C aug3.g4198 LOC107451660 0
60 LOC107446080 Ptep1.0/2.0 NW_024969727.1 155592 168820 - cyclin-dependent kinase 20 aug3.g1238 LOC107446080 0
61 LOC107437822 Ptep1.0/2.0 NW_024970078.1 2219 37442 + sentrin-specific protease 6 aug3.g26588 LOC107437822 0
62 LOC107440818 Ptep1.0/2.0 NW_024969740.1 1397511 1405818 - uncharacterized LOC107440818 aug3.g27162 LOC107440818 0
63 LOC107438277 Ptep1.0/2.0 NW_024969753.1 1097287 1113483 - Krueppel-like factor 5 aug3.g26435 LOC107438277 0
64 LOC107436623 Ptep1.0/2.0 NW_024970548.1 149824 183056 - neuronal calcium sensor 1 aug3.g11709 LOC107436623 0
65 LOC107437748 Ptep1.0/2.0 NW_024969659.1 2396380 2411412 - adipolin aug3.g12543 LOC107437748 0
66 LOC107451573 Ptep1.0/2.0 NW_024970106.1 1088912 1111291 - 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial aug3.g4125 LOC107451573 0
67 LOC107439278 Ptep1.0/2.0 NW_024969646.1 3785604 3897855 - uncharacterized LOC107439278 aug3.g13670 LOC107439278 0
68 LOC107443911 Ptep1.0/2.0 NW_024970165.1 417009 611387 + plexin-B aug3.g573 LOC107443911 0
69 LOC107456361 Ptep1.0/2.0 NW_024970195.1 319203 413295 - uncharacterized LOC107456361 aug3.g10951 LOC107456361 0
70 LOC107446074 Ptep1.0/2.0 NW_024969638.1 486050 647375 - glypican-5 aug3.g1222 LOC107446074 0
71 LOC107445214 Ptep1.0/2.0 NW_024971245.1 51238 99418 - sodium-dependent neutral amino acid transporter B(0)AT3 aug3.g18382,aug3.g18383 LOC107445214 0
72 LOC107453922 Ptep1.0/2.0 NW_024969687.1 966537 1002694 + four-jointed box protein 1 aug3.g5891 LOC107453922 0
73 LOC107438836 Ptep1.0/2.0 NW_024969620.1 1317647 1343704 - SPARC aug3.g26560 LOC107438836 0
74 LOC107441084 Ptep1.0/2.0 NW_024969675.1 143417 263212 + low-density lipoprotein receptor-related protein 2 aug3.g9796 LOC107441084 0
75 LOC107444748 Ptep1.0/2.0 NW_024970651.1 124752 158939 - uncharacterized LOC107444748 aug3.g18068 LOC107444748 0
76 LOC107446220 Ptep1.0/2.0 NW_024971225.1 16884 19096 - transcription factor Sox-14-like aug3.g24914,aug3.g24896 LOC107446335,LOC107446220 0
77 LOC107451335 Ptep1.0/2.0 NW_024970681.1 30507 68091 - fatty acid-binding protein aug3.g3973 LOC107451335 0
78 LOC107451942 Ptep1.0/2.0 NW_024970461.1 153699 226970 + protein NDNF aug3.g4413 LOC107451942 0
79 LOC107443537 Ptep1.0/2.0 NW_024969659.1 478057 505195 - uncharacterized LOC107443537 aug3.g471 LOC107443537 0
80 LOC107440707 Ptep1.0/2.0 NW_024969921.1 967259 1043762 - homeobox protein Mix.2-like aug3.g27124 LOC107440707 0
81 LOC107442925 Ptep1.0/2.0 NW_024970173.1 410777 473979 + bone morphogenetic protein 4-like aug3.g16926 LOC107442925 0
82 LOC107454846 Ptep1.0/2.0 NW_024970597.1 135149 243858 - RNA-binding protein fusilli aug3.g10830 LOC107454846 0
83 LOC107437305 Ptep1.0/2.0 NW_024970197.1 359527 396131 - zinc finger protein ZIC 4-like aug3.g12202 LOC107437305 0
84 LOC107455786 Ptep1.0/2.0 NW_024970695.1 103009 137298 + conserved oligomeric Golgi complex subunit 7 aug3.g8024 LOC107455786 0
85 LOC107442148 Ptep1.0/2.0 NW_024970004.1 123208 128927 + frizzled-4 aug3.g27554 LOC107442148 0
86 LOC107447950 Ptep1.0/2.0 NW_024969607.1 481897 500635 - protein lifeguard 2 aug3.g15222,aug3.g6216 LOC107447950 0
87 LOC107450100 Ptep1.0/2.0 NW_024969801.1 3126345 3185727 + homeobox protein DLX-6-like aug3.g15531 LOC107450100 0
88 LOC107451030 Ptep1.0/2.0 NW_024969755.1 393287 429793 - proton channel OtopLc aug3.g211 LOC107451030 0
89 LOC107453510 Ptep1.0/2.0 NW_024970128.1 82795 113461 + uncharacterized LOC107453510 aug3.g23818,aug3.g23819 LOC107453510 0
90 LOC107457110 Ptep1.0/2.0 NW_024969920.1 2847957 2878609 - prostaglandin reductase 3 aug3.g9097 LOC107457110 0
91 LOC107441015 Ptep1.0/2.0 NW_024969678.1 1682673 1688734 - uncharacterized LOC107441015 aug3.g14947 LOC107441015 0
92 LOC107438179 Ptep1.0/2.0 NW_024970417.1 288312 353627 - DNA ligase 1 aug3.g12888 LOC107438179 0
93 LOC107441203 Ptep1.0/2.0 NW_024969863.1 106711 125793 + potassium voltage-gated channel subfamily B member 2 aug3.g27237 LOC107441203 0
94 LOC110283431 Ptep1.0/2.0 NW_024969869.1 895642 904912 - uncharacterized LOC110283431 aug3.g18539 LOC110283431 0
95 LOC107439058 Ptep1.0/2.0 NW_024971146.1 12939 94546 + regulator of G-protein signaling 12 aug3.g26650,aug3.g24025 LOC107439058 0
96 LOC107456104 Ptep1.0/2.0 NW_024970773.1 124949 140750 + uncharacterized LOC107456104 aug3.g10934,aug3.g18321 LOC107456104 0
97 LOC107455566 Ptep1.0/2.0 NW_024969728.1 733403 751360 - synaptogyrin-1 aug3.g7863 LOC107455566 0
98 LOC107452647 Ptep1.0/2.0 NW_024969683.1 1140511 1159342 - uncharacterized LOC107452647 aug3.g23644 LOC107452647 0
99 LOC107452953 Ptep1.0/2.0 NW_024970379.1 75458 138289 + macoilin-1 aug3.g5111,aug3.g21074 LOC107450123,LOC107452953 0
100 LOC107450601 Ptep1.0/2.0 NW_024969913.1 90916 162015 + uncharacterized LOC107450601 aug3.g3466,aug3.g3467,aug3.g25011 LOC107450601 0
101 LOC107445333 Ptep1.0/2.0 NW_024971372.1 39254 81786 - breast cancer anti-estrogen resistance protein 3 homolog aug3.g18478 LOC107445333 0
102 LOC107449990 Ptep1.0/2.0 NW_024969877.1 413591 451566 - uncharacterized LOC107449990 aug3.g3073 LOC107449990 0
103 LOC107449226 Ptep1.0/2.0 NW_024969810.1 603309 915854 - homeobox protein extradenticle aug3.g20631,aug3.g20467 LOC107449226 0
104 LOC107438424 Ptep1.0/2.0 NW_024969843.1 707196 752282 - acyl-CoA-binding domain-containing protein 5 aug3.g26488 LOC107438424 0
105 LOC107452759 Ptep1.0/2.0 NW_024969963.1 232686 281841 - DNA polymerase alpha catalytic subunit aug3.g4949,aug3.g24390 LOC107438778,LOC107452759,LOC107446483 0
106 LOC107443047 Ptep1.0/2.0 NW_024969961.1 124689 238865 + serine/threonine-protein kinase 17A aug3.g27830 LOC107443047 0
107 LOC107451800 Ptep1.0/2.0 NW_024969937.1 222149 258792 + carboxy-terminal kinesin 2 aug3.g4311 LOC107451800 0
108 LOC107441879 Ptep1.0/2.0 NW_024970245.1 282438 398184 + talin-2 aug3.g16213,aug3.g16214 LOC107441879 0
109 records were found.(Max.=1000)

References
1) Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis. Front. Cell Dev. Biol. 10:933220.
2) Takanori Akaiwa, Hiroki Oda, Yasuko Akiyama-Oda (2025) Genome-wide quantitative dissection of an arthropod segmented body plan at single-cell resolution Communications Biology 8:913.
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Last updated by hiroki oda, 2025.6.12