Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Dataset ID: sn1_st7 | GeneID(LOC) list: cluster_9


word count=101
Gene/Transcript Records
query No.NCBI geneID (-> UMAP)stage 5lstage 7stage 5lstage 7Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
1 LOC107444504 Ptep1.0/2.0 NW_024970398.1 393001 427831 - uncharacterized LOC107444504 aug3.g10054 LOC107444504 0
2 LOC107447499 Ptep1.0/2.0 NW_024969702.1 1206168 1373996 + uncharacterized LOC107447499 LOC107447499 0
3 LOC107447606 Ptep1.0/2.0 NW_024971237.1 9352 67313 + palmitoleoyl-protein carboxylesterase notum1 aug3.g9270 LOC107447606 0
4 LOC107450670 Ptep1.0/2.0 NW_024969605.1 1868024 1962441 - uncharacterized LOC107450670 aug3.g15599 LOC107450670 9e-139
5 LOC107438015 Ptep1.0/2.0 NW_024970324.1 150825 183689 - growth arrest-specific protein 1 aug3.g9575 LOC107438015 0
6 LOC107443647 Ptep1.0/2.0 NW_024969633.1 2459596 2538273 + plexin-B aug3.g17369 LOC107443647 0
7 LOC107447498 Ptep1.0/2.0 NW_024969702.1 1136035 1347933 - homeotic protein antennapedia aug3.g1791 LOC107447498 0
8 LOC107456525 Ptep1.0/2.0 NW_024969618.1 110060 125331 - delta-like protein 1 aug3.g25248 LOC107456525 0
9 LOC107448645 Ptep1.0/2.0 NW_024969804.1 48527 119773 - transcription factor Sp9 aug3.g2333 LOC107448645 0
10 LOC107447678 Ptep1.0/2.0 NW_024969609.1 2445589 2461432 + homeobox protein MSH-D aug3.g15189 LOC107447678 0
11 LOC107451685 Ptep1.0/2.0 NW_024969853.1 177887 310356 - roundabout homolog 3 aug3.g10604 LOC107451685 0
12 LOC107446080 Ptep1.0/2.0 NW_024969727.1 155592 168820 - cyclin-dependent kinase 20 aug3.g1238 LOC107446080 0
13 LOC107451660 Ptep1.0/2.0 NW_024970846.1 24518 42153 - vitamin K-dependent protein C aug3.g4198 LOC107451660 0
14 LOC107450661 Ptep1.0/2.0 NW_024970076.1 528474 601609 - homeobox protein Hox-A5 aug3.g15606 LOC107450661 0
15 LOC107453771 Ptep1.0/2.0 NW_024969727.1 973540 1095466 - SPARC-related modular calcium-binding protein 2 aug3.g5781 LOC107453771 0
16 LOC107438758 Ptep1.0/2.0 NW_024970060.1 453865 533783 - epidermal growth factor receptor aug3.g13345,aug3.g13344 LOC107438758 0
17 LOC107451346 Ptep1.0/2.0 NW_024969701.1 587386 878494 - latrophilin Cirl aug3.g25404 LOC107451346 0
18 LOC107440707 Ptep1.0/2.0 NW_024969921.1 967259 1043762 - homeobox protein Mix.2-like aug3.g27124 LOC107440707 0
19 LOC107442050 Ptep1.0/2.0 NW_024970088.1 426101 534623 - laminin subunit alpha-1 aug3.g16317 LOC107442050 0
20 LOC107446115 Ptep1.0/2.0 NW_024970281.1 10697 82354 - extracellular sulfatase Sulf-1 aug3.g18939 LOC107446115 0
21 LOC107444558 Ptep1.0/2.0 NW_024969661.1 1338004 1430226 - paired box protein Pax-5 aug3.g762 LOC107444558 0
22 LOC107441660 Ptep1.0/2.0 NW_024970650.1 7267 100342 - unconventional myosin-Ie aug3.g9845,aug3.g9846,aug3.g22123 LOC107441660 0
23 LOC107444120 Ptep1.0/2.0 NW_024969702.1 254507 471515 - homeobox protein Hox-C4 aug3.g17637,aug3.g17639 LOC107444120 0
24 LOC107448429 Ptep1.0/2.0 NW_024969636.1 1508196 1528269 + uncharacterized LOC107448429 aug3.g2220 LOC107448429 0
25 LOC107440619 Ptep1.0/2.0 NW_024970318.1 289854 377527 - ETS domain-containing protein Elk-1 aug3.g9766 LOC107440619 0
26 LOC107442927 Ptep1.0/2.0 NW_024971052.1 33401 43140 + uncharacterized LOC107442927 LOC107442927 0
27 LOC107443537 Ptep1.0/2.0 NW_024969659.1 478057 505195 - uncharacterized LOC107443537 aug3.g471 LOC107443537 0
28 LOC107446715 Ptep1.0/2.0 NW_024970427.1 50411 103955 - protein toll aug3.g19333 LOC107446715 0
29 LOC107454167 Ptep1.0/2.0 NW_024995499.1 704 1065 + dorsal-ventral patterning protein Sog-like aug3.g23966 LOC107454167 0
29 LOC107454167_1 Ptep1.0/2.0 NW_024969641.1 594712 690101 + dorsal-ventral patterning protein Sog-like aug3.g23966 LOC107454167 0
30 LOC107441543 Ptep1.0/2.0 NW_024969929.1 241508 328950 - neurotactin aug3.g27319 LOC107441543 0
31 LOC107454846 Ptep1.0/2.0 NW_024970597.1 135149 243858 - RNA-binding protein fusilli aug3.g10830 LOC107454846 0
32 LOC107456864 Ptep1.0/2.0 NW_024969914.1 23567 109354 - exonuclease GOR-like aug3.g18504,aug3.g1256 LOC107456864 0
33 LOC107445228 Ptep1.0/2.0 NW_024970111.1 88004 113931 - protein gooseberry aug3.g18397 LOC107445228 0
34 LOC107444341 Ptep1.0/2.0 NW_024970110.1 358081 521001 - zinc finger and BTB domain-containing protein 24 aug3.g17796 LOC107444341 0
35 LOC107457180 Ptep1.0/2.0 NW_024969714.1 1023351 1149707 - protein jagged-1 aug3.g9162,aug3.g9161 LOC107457180 0
36 LOC107436358 Ptep1.0/2.0 NW_024969815.1 644726 725669 + fasciclin-2 aug3.g11491 LOC107436358 0
37 LOC107456664 Ptep1.0/2.0 NW_024970326.1 218582 224336 - uncharacterized LOC107456664 aug3.g8740 LOC107456664 0
38 LOC107455285 Ptep1.0/2.0 NW_024970111.1 152980 173757 + abhydrolase domain-containing protein C22H12.03 aug3.g6972 LOC107455285 0
39 LOC107453499 Ptep1.0/2.0 NW_024969603.1 1608727 1711074 - zinc finger homeobox protein 4 aug3.g25763 LOC107453499 0
40 LOC107446220 Ptep1.0/2.0 NW_024971225.1 16884 19096 - transcription factor Sox-14-like aug3.g24914,aug3.g24896 LOC107446335,LOC107446220 0
41 LOC107436894 Ptep1.0/2.0 NW_024969612.1 1030321 1221533 + zinc finger protein rotund aug3.g394 LOC107436894 0
42 LOC107436623 Ptep1.0/2.0 NW_024970548.1 149824 183056 - neuronal calcium sensor 1 aug3.g11709 LOC107436623 0
43 LOC107437401 Ptep1.0/2.0 NW_024970116.1 391471 482686 - tyrosine-protein kinase Btk29A aug3.g26243 LOC107437401 0
44 LOC107441179 Ptep1.0/2.0 NW_024969792.1 550824 620514 + protein grainyhead aug3.g27212,aug3.g23194,aug3.g10582 LOC107441179,LOC107451351 0
45 LOC107449611 Ptep1.0/2.0 NW_024969901.1 310205 442919 - protein dachsous aug3.g2859 LOC107449611 0
46 LOC107445428 Ptep1.0/2.0 NW_024969822.1 115253 166067 - BMP and activin membrane-bound inhibitor homolog aug3.g18541 LOC107445428 0
47 LOC107438301 Ptep1.0/2.0 NW_024970082.1 78025 165064 + zinc finger protein 236 aug3.g12961 LOC107438301 0
48 LOC107439278 Ptep1.0/2.0 NW_024969646.1 3785604 3897855 - uncharacterized LOC107439278 aug3.g13670 LOC107439278 0
49 LOC107457357 Ptep1.0/2.0 NW_024969595.1 852934 1109016 - tyrosine-protein kinase RYK aug3.g25882 LOC107457357 0
50 LOC107445694 Ptep1.0/2.0 NW_024969911.1 448052 571614 + unconventional myosin-Vb aug3.g9254,aug3.g6148,aug3.g21618 LOC107445694 0
51 LOC107443946 Ptep1.0/2.0 NW_024970769.1 73366 90135 + extracellular serine/threonine protein kinase four-jointed-like aug3.g581 LOC107443946 0
52 LOC107448951 Ptep1.0/2.0 NW_024969736.1 1621274 1652709 - BTB/POZ domain-containing protein kctd15-like aug3.g2480 LOC107448951 0
53 LOC107455742 Ptep1.0/2.0 NW_024969954.1 252968 304281 + protein hunchback-like aug3.g25126 LOC107455742 0
54 LOC107453510 Ptep1.0/2.0 NW_024970128.1 82795 113461 + uncharacterized LOC107453510 aug3.g23818,aug3.g23819 LOC107453510 0
55 LOC107443364 Ptep1.0/2.0 NW_024970254.1 5297 27059 + uncharacterized LOC107443364 aug3.g17172 LOC107443364 0
56 LOC110283431 Ptep1.0/2.0 NW_024969869.1 895642 904912 - uncharacterized LOC110283431 aug3.g18539 LOC110283431 0
57 LOC107446074 Ptep1.0/2.0 NW_024969638.1 486050 647375 - glypican-5 aug3.g1222 LOC107446074 0
58 LOC107450096 Ptep1.0/2.0 NW_024969801.1 2449227 2502775 + sodium- and chloride-dependent glycine transporter 1 aug3.g15542 LOC107450096 0
59 LOC107454760 Ptep1.0/2.0 NW_024969730.1 633181 756431 - ankyrin repeat domain-containing protein 6 aug3.g24117 LOC107454760 0
60 LOC107444748 Ptep1.0/2.0 NW_024970651.1 124752 158939 - uncharacterized LOC107444748 aug3.g18068 LOC107444748 0
61 LOC107455850 Ptep1.0/2.0 NW_024970537.1 67033 131929 - transmembrane protein 178B aug3.g8086,aug3.g8085 LOC107455850 0
62 LOC107448451 Ptep1.0/2.0 NW_024969636.1 1217352 1376437 + band 4.1-like protein 4 aug3.g2228 LOC107448451 0
63 LOC107438220 Ptep1.0/2.0 NW_024969817.1 766387 824501 - MICAL-like protein 1 aug3.g12909 LOC107438220 0
64 LOC107442886 Ptep1.0/2.0 NW_024969829.1 716446 812748 + leucine-rich repeats and immunoglobulin-like domains protein 3 aug3.g27784,aug3.g27783 LOC107442886 0
65 LOC122272478 Ptep1.0/2.0 NW_024972072.1 7613 14561 - uncharacterized LOC122272478 NA 0
66 LOC107443047 Ptep1.0/2.0 NW_024969961.1 124689 238865 + serine/threonine-protein kinase 17A aug3.g27830 LOC107443047 0
67 LOC107450063 Ptep1.0/2.0 NW_024969698.1 603238 707119 + homeobox protein Meis1 aug3.g3111 LOC107450063 0
68 LOC107437115 Ptep1.0/2.0 NW_024969780.1 1611276 1705234 - one cut domain family member 2 aug3.g26177 LOC107437115 0
69 LOC122271545 Ptep1.0/2.0 NW_024970920.1 42550 50805 + uncharacterized LOC122271545 NA 0
70 LOC107440818 Ptep1.0/2.0 NW_024969740.1 1397511 1405818 - uncharacterized LOC107440818 aug3.g27162 LOC107440818 0
71 LOC107453182 Ptep1.0/2.0 NW_024970113.1 220015 243196 + elongation of very long chain fatty acids protein 6 aug3.g5294 LOC107453182 0
72 LOC107438732 Ptep1.0/2.0 NW_024969622.1 1361500 1374934 + somatomedin-B and thrombospondin type-1 domain-containing protein aug3.g26535 LOC107438732 0
73 LOC107453540 Ptep1.0/2.0 NW_024970087.1 488106 518390 + kinesin-like protein KIF3A aug3.g5560 LOC107453540 0
74 LOC107453597 Ptep1.0/2.0 NW_024969905.1 484247 573318 + fibroblast growth factor 8 aug3.g5611 LOC107453597 0
75 LOC107453601 Ptep1.0/2.0 NW_024969989.1 171471 222480 + protein transport protein Sec24A aug3.g5615 LOC107453601 0
76 LOC107450600 Ptep1.0/2.0 NW_024969913.1 291054 431148 + CLIP-associating protein 2 aug3.g3468 LOC107450600 0
77 LOC107447528 Ptep1.0/2.0 NW_024971123.1 16110 106470 - tight junction protein ZO-1 aug3.g1798 LOC107447528 0
78 LOC107436108 Ptep1.0/2.0 NW_024969622.1 155305 180417 + ankyrin repeat domain-containing protein 10 aug3.g11322 LOC107436108 0
79 LOC107447651 Ptep1.0/2.0 NW_024970442.1 18729 40945 - uncharacterized LOC107447651 aug3.g1855,aug3.g1854 LOC107447651 0
80 LOC107437748 Ptep1.0/2.0 NW_024969659.1 2396380 2411412 - adipolin aug3.g12543 LOC107437748 0
81 LOC107451464 Ptep1.0/2.0 NW_024970103.1 528261 530087 + transcription factor HES-4-A-like aug3.g4026 LOC107451464 0
82 LOC107452612 Ptep1.0/2.0 NW_024969646.1 2491603 2626474 - lysine-specific demethylase 6A aug3.g260 LOC107452612 0
83 LOC107448298 Ptep1.0/2.0 NW_024971929.1 3124 49225 + transcriptional enhancer factor TEF-1 aug3.g15304 LOC107448298 0
84 LOC107446048 Ptep1.0/2.0 NW_024970843.1 2755 152521 + epidermal growth factor receptor aug3.g18901 LOC107446048 0
85 LOC107438830 Ptep1.0/2.0 NW_024969620.1 1697828 1822919 - uncharacterized LOC107438830 aug3.g26553 LOC107438830 0
86 LOC107441406 Ptep1.0/2.0 NW_024971166.1 58212 95218 + uncharacterized LOC107441406 aug3.g27275 LOC107441406 0
87 LOC107451935 Ptep1.0/2.0 NW_024970461.1 299951 444272 + uncharacterized LOC107451935 aug3.g4410,aug3.g4409 LOC107451935 0
88 LOC107451054 Ptep1.0/2.0 NW_024970106.1 3923686 3944856 - zinc finger protein 41 aug3.g15673 LOC107451054 0
89 LOC107452211 Ptep1.0/2.0 NW_024969686.1 1531235 1597783 + mediator of RNA polymerase II transcription subunit 13 aug3.g4594 LOC107452211 0
90 LOC107445751 Ptep1.0/2.0 NW_024970056.1 594018 724305 - unconventional myosin-XV aug3.g18724,aug3.g12030,aug3.g20161,aug3.g20780 LOC107445751 0
91 LOC107440424 Ptep1.0/2.0 NW_024970337.1 44274 244532 + CCR4-NOT transcription complex subunit 6-like aug3.g27048 LOC107440424 0
92 LOC107445535 Ptep1.0/2.0 NW_024970431.1 69745 146620 + meckelin aug3.g1073 LOC107445535 0
93 LOC107449833 Ptep1.0/2.0 NW_024969809.1 752362 955228 - autism susceptibility gene 2 protein aug3.g2985,aug3.g22797,aug3.g21033 LOC107449833 0
94 LOC107436691 Ptep1.0/2.0 NW_024969616.1 2378897 2439753 + uncharacterized LOC107436691 aug3.g11765 LOC107436691 0
95 LOC107450126 Ptep1.0/2.0 NW_024970833.1 24806 197601 - ubiquitin carboxyl-terminal hydrolase 34 aug3.g3140,aug3.g3138,aug3.g24193 LOC107441888,LOC107450126 0
96 LOC107448079 Ptep1.0/2.0 NW_024969687.1 1185366 1275530 + putative epidermal cell surface receptor aug3.g20118 LOC107448079 0
97 LOC107443783 Ptep1.0/2.0 NW_024969706.1 2038945 2314643 - plexin-A2 aug3.g428 LOC107443783 0
98 LOC107452953 Ptep1.0/2.0 NW_024970379.1 75458 138289 + macoilin-1 aug3.g5111,aug3.g21074 LOC107450123,LOC107452953 0
99 LOC107440093 Ptep1.0/2.0 NW_024971605.1 27556 50954 + protein zwilch homolog aug3.g26977 LOC107440093 0
100 LOC107441084 Ptep1.0/2.0 NW_024969675.1 143417 263212 + low-density lipoprotein receptor-related protein 2 aug3.g9796 LOC107441084 0
101 LOC107451016 Ptep1.0/2.0 NW_024970397.1 16276 158040 + histone lysine acetyltransferase CREBBP aug3.g232 LOC107451016 0
102 records were found.(Max.=1000)

References
1) Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis. Front. Cell Dev. Biol. 10:933220.
2) Takanori Akaiwa, Hiroki Oda, Yasuko Akiyama-Oda (2025) Genome-wide quantitative dissection of an arthropod segmented body plan at single-cell resolution Communications Biology 8:913.
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Last updated by hiroki oda, 2025.6.12