Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445363 Ptep1.0/2.0 NW_024969890.1 417503 431008 - glutathione-specific gamma-glutamylcyclotransferase 1 aug3.g1025 LOC107445363 0
LOC107447283 Ptep1.0/2.0 NW_024970057.1 37182 38204 + uncharacterized LOC107447283 aug3.g10259 LOC107447283 0
LOC107447314 Ptep1.0/2.0 NW_024970057.1 198764 337182 + transmembrane protein 151B-like aug3.g10258 LOC107447314 0
LOC107447305 Ptep1.0/2.0 NW_024970057.1 530012 539519 - uncharacterized LOC107447305 aug3.g10257 LOC107447305 0
LOC122270304 Ptep1.0/2.0 NW_024970129.1 634167 634604 + uncharacterized LOC122270304 aug3.g15815,aug3.g10251,aug3.g1874 NA 0
LOC107447222 Ptep1.0/2.0 NW_024970879.1 32293 48776 + cell adhesion molecule 2-like aug3.g10250 LOC107447222 0
LOC107447254 Ptep1.0/2.0 NW_024970879.1 86972 141056 + lachesin aug3.g10250 LOC107447254 0
LOC107447240 Ptep1.0/2.0 NW_024971006.1 182702 183415 + uncharacterized LOC107447240 aug3.g10253,aug3.g22171,aug3.g2595 LOC107447240 0
LOC122268315 Ptep1.0/2.0 NW_024971989.1 6197 29106 + pseudogene aug3.g24093,aug3.g19007,aug3.g15744,aug3.g11997,aug3.g24247,aug3.g10254,aug3.g24212,aug3.g9814 NA 0
LOC107447273 Ptep1.0/2.0 NW_024977341.1 1372 4285 - uncharacterized LOC107447273 aug3.g10256 LOC107447273 7e-103
LOC122268634 Ptep1.0/2.0 NW_025010853.1 8 746 + uncharacterized LOC122268634 aug3.g10259 NA 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02