Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445353 Ptep1.0/2.0 NW_024969890.1 303223 337666 + peptidyl-prolyl cis-trans isomerase G aug3.g1028 LOC107445353 0
LOC107447582 Ptep1.0/2.0 NW_024971183.1 10439 35668 - uncharacterized LOC107447582 aug3.g10281,aug3.g8597 LOC107447582 0
LOC107447624 Ptep1.0/2.0 NW_024971183.1 40745 52786 - uncharacterized LOC107447624 aug3.g10282 LOC107447624 0
LOC107447632 Ptep1.0/2.0 NW_024971183.1 56939 91879 - uncharacterized LOC107447632 aug3.g10283 LOC107447632 0
LOC122271818 Ptep1.0/2.0 NW_024971183.1 90797 92138 + myb-like protein D aug3.g10285 NA 0
LOC122271819 Ptep1.0/2.0 NW_024971183.1 93097 98574 + uncharacterized LOC122271819 aug3.g10284 NA 0
LOC122271820 Ptep1.0/2.0 NW_024971183.1 98581 100337 + uncharacterized LOC122271820 aug3.g10284 NA 0
LOC107447652 Ptep1.0/2.0 NW_024971183.1 107082 128443 + fanconi-associated nuclease 1 aug3.g10285 LOC107447652 0
LOC107449768 Ptep1.0/2.0 NW_024971183.1 144823 168251 + alkaline phosphatase-like aug3.g10288 LOC107449768 0
LOC107447590 Ptep1.0/2.0 NW_024971192.1 86736 87314 + cyclin-dependent kinase-like 4 aug3.g10289 LOC107447590 0
LOC107447662 Ptep1.0/2.0 NW_024971192.1 96499 117810 - alkaline phosphatase aug3.g10288,aug3.g10286,aug3.g20928 LOC107447662 0
LOC107436915 Ptep1.0/2.0 NW_024972270.1 3714 8048 - cyclin-dependent kinase-like 4 aug3.g11923,aug3.g10790,aug3.g2348,aug3.g5240,aug3.g10289,aug3.g21119,aug3.g1614,aug3.g13895,aug3.g13894 LOC107436915 0
LOC122272584 Ptep1.0/2.0 NW_024972298.1 17795 19587 - uncharacterized LOC122272584 aug3.g10284 NA 0
LOC107448041 Ptep1.0/2.0 NW_024972298.1 24818 28041 - uncharacterized LOC107448041 aug3.g20101,aug3.g10284 LOC107448041 0
LOC122268572 Ptep1.0/2.0 NW_025001948.1 184 563 - uncharacterized LOC122268572 aug3.g1028 NA 4e-77
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02