Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448524 Ptep1.0/2.0 NW_024969597.1 1606508 1643604 + cilia- and flagella-associated protein 251 aug3.g10369 LOC107448524,LOC107448490,LOC107448534 0
LOC107445410 Ptep1.0/2.0 NW_024969696.1 774857 788249 - putative ATP synthase subunit f, mitochondrial aug3.g1036 LOC107445410 0
LOC122269193 Ptep1.0/2.0 NW_024969756.1 264343 264541 - uncharacterized LOC122269193 aug3.g10367 NA 3e-41
LOC107448392 Ptep1.0/2.0 NW_024970624.1 2827 64356 - MAU2 chromatid cohesion factor homolog aug3.g10360 LOC107448392 0
LOC107448404 Ptep1.0/2.0 NW_024970624.1 64387 65668 + etoposide-induced protein 2.4 homolog aug3.g10361 LOC107448404 0
LOC107448412 Ptep1.0/2.0 NW_024970624.1 71162 72645 - exosome complex component RRP45 aug3.g10362 LOC107448412 0
LOC107448423 Ptep1.0/2.0 NW_024970624.1 72711 77111 + dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial aug3.g10363 LOC107448423 0
LOC122271178 Ptep1.0/2.0 NW_024970624.1 82643 92231 - uncharacterized LOC122271178 aug3.g10364,aug3.g23169 NA 0
LOC107448433 Ptep1.0/2.0 NW_024970624.1 92453 139855 + protein dispatched aug3.g10365 LOC107448433 0
LOC107448459 Ptep1.0/2.0 NW_024970624.1 152111 183401 + gamma-glutamyl hydrolase aug3.g10366 LOC107448459 0
LOC107448385 Ptep1.0/2.0 NW_024970624.1 186359 266786 - protein FAM13B aug3.g10367,aug3.g10366 LOC107437759,LOC107448385 0
LOC107448479 Ptep1.0/2.0 NW_024970624.1 266892 276652 + coiled-coil domain-containing protein 97 aug3.g10368 LOC107448479 0
LOC122271755 Ptep1.0/2.0 NW_024971121.1 51542 51740 - uncharacterized LOC122271755 aug3.g10367 NA 3e-41
LOC122272113 Ptep1.0/2.0 NW_024971507.1 28419 28617 - uncharacterized LOC122272113 aug3.g10367 NA 3e-41
LOC122268710 Ptep1.0/2.0 NW_025029441.1 68143 68341 - uncharacterized LOC122268710 aug3.g10367 NA 3e-41
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02