Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448516 Ptep1.0/2.0 NW_024969597.1 1362039 1394343 + organic cation transporter protein aug3.g10378 LOC107448516 0
LOC107448511 Ptep1.0/2.0 NW_024969597.1 1397320 1418684 + carcinine transporter aug3.g10377 LOC107448511 0
LOC107448583 Ptep1.0/2.0 NW_024969597.1 1427144 1436712 + 40S ribosomal protein S14a aug3.g10376 LOC107448583 0
LOC107448505 Ptep1.0/2.0 NW_024969597.1 1443206 1460163 + flocculation protein FLO1 aug3.g10374 LOC107448505 0
LOC122271638 Ptep1.0/2.0 NW_024969597.1 1492563 1493306 + integumentary mucin C.1-like aug3.g10374 LOC107448495 0
LOC107448495 Ptep1.0/2.0 NW_024969597.1 1494768 1501904 + uncharacterized LOC107448495 aug3.g10374 LOC107448495 0
LOC107448577 Ptep1.0/2.0 NW_024969597.1 1503077 1523876 - macrophage mannose receptor 1 aug3.g10373 LOC107448577 0
LOC107448550 Ptep1.0/2.0 NW_024969597.1 1525452 1543162 - macrophage mannose receptor 1 aug3.g10372 LOC107448494,LOC107448550 0
LOC107448540 Ptep1.0/2.0 NW_024969597.1 1547429 1570062 - macrophage mannose receptor 1 aug3.g10372,aug3.g10373 LOC107448540 0
LOC107448562 Ptep1.0/2.0 NW_024969597.1 1602243 1606392 - ATP-dependent zinc metalloprotease YME1L aug3.g10370 LOC107448562 0
LOC107445409 Ptep1.0/2.0 NW_024969696.1 788220 840500 + sorting nexin-14 aug3.g1037 LOC107453014,LOC107445409 0
LOC107448617 Ptep1.0/2.0 NW_024971073.1 149273 167709 - acyl-CoA Delta-9 desaturase aug3.g10379,aug3.g16571 LOC107448617 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02