Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107452809 Ptep1.0/2.0 NW_024969863.1 1369706 1382170 + cardioacceleratory peptide receptor-like aug3.g10669 LOC107452809 0
LOC107445451 Ptep1.0/2.0 NW_024970009.1 318269 337020 - protein-L-isoaspartate(D-aspartate) O-methyltransferase aug3.g1066 LOC107441135,LOC107445451 0
LOC107452336 Ptep1.0/2.0 NW_024970364.1 71371 77349 - uncharacterized LOC107452336 aug3.g10660 LOC107452336 0
LOC107452337 Ptep1.0/2.0 NW_024970364.1 82799 85099 - uncharacterized LOC107452337 aug3.g10661 LOC107452337 0
LOC107452344 Ptep1.0/2.0 NW_024970364.1 86184 158638 + eukaryotic translation initiation factor 2-alpha kinase 3 aug3.g10662 LOC107452344 0
LOC107452354 Ptep1.0/2.0 NW_024970364.1 162963 170974 + leucine-rich repeat transmembrane neuronal protein 1 aug3.g10663 LOC107452354 0
LOC107452360 Ptep1.0/2.0 NW_024970364.1 173501 218730 - rho GTPase-activating protein 27 aug3.g10664 LOC107452360 0
LOC107452375 Ptep1.0/2.0 NW_024970364.1 204060 224898 + uncharacterized LOC107452375 aug3.g10665 LOC107452375 0
LOC107452383 Ptep1.0/2.0 NW_024970364.1 229402 256861 + solute carrier family 35 member F5 aug3.g10666 LOC107452383 0
LOC107452408 Ptep1.0/2.0 NW_024970364.1 283734 457765 + Na(+)/H(+) exchanger beta aug3.g10667 LOC107452408 0
LOC122273182 Ptep1.0/2.0 NW_024974589.1 3050 5569 - rho GTPase-activating protein 12-like aug3.g10664 NA 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02