Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122268984 Ptep1.0/2.0 NW_024969710.1 1090750 1092622 + tigger transposable element-derived protein 4-like aug3.g10676,aug3.g24229,aug3.g24228,aug3.g17025,aug3.g7884 NA 0
LOC122269499 Ptep1.0/2.0 NW_024969842.1 144924 145861 - tigger transposable element-derived protein 6-like aug3.g10676 NA 0
LOC122269621 Ptep1.0/2.0 NW_024969876.1 844341 846340 - uncharacterized LOC122269621 aug3.g10676 NA 0
LOC122269895 Ptep1.0/2.0 NW_024969974.1 702775 704999 + tigger transposable element-derived protein 4-like aug3.g10676 NA 0
LOC107445454 Ptep1.0/2.0 NW_024970009.1 285268 314082 + uncharacterized LOC107445454 aug3.g1067 LOC107445454 0
LOC107451265 Ptep1.0/2.0 NW_024970061.1 84971 85754 - uncharacterized LOC107451265 aug3.g3899,aug3.g4072,aug3.g10673 LOC107451265 0
LOC122270234 Ptep1.0/2.0 NW_024970104.1 502532 503119 - tigger transposable element-derived protein 6-like aug3.g10676 NA 3e-122
LOC122270938 Ptep1.0/2.0 NW_024970461.1 1025333 1026364 + uncharacterized LOC122270938 aug3.g10673 NA 0
LOC107452879 Ptep1.0/2.0 NW_024970466.1 54233 66499 - uncharacterized LOC107452879 aug3.g10674 LOC107452879 0
LOC107452893 Ptep1.0/2.0 NW_024970466.1 135153 137744 + uncharacterized LOC107452893 aug3.g10677 LOC107452893 5e-41
LOC107452912 Ptep1.0/2.0 NW_024970466.1 162925 172413 + uncharacterized LOC107452912 aug3.g10678 LOC107452912 0
LOC122271179 Ptep1.0/2.0 NW_024970624.1 94782 96279 + tigger transposable element-derived protein 2-like aug3.g10676 NA 0
LOC122271549 Ptep1.0/2.0 NW_024970923.1 186176 186913 - tigger transposable element-derived protein 4-like aug3.g10676 NA 0
LOC107452852 Ptep1.0/2.0 NW_024970933.1 7250 66184 - SCY1-like protein 2 aug3.g10672 LOC107452852,LOC110283375 0
LOC107452835 Ptep1.0/2.0 NW_024970933.1 84569 142755 - zinc finger MYM-type protein 4 aug3.g10671 LOC107452835 0
LOC122271892 Ptep1.0/2.0 NW_024971281.1 30600 37934 + tigger transposable element-derived protein 6-like aug3.g10676 NA 0
LOC122273633 Ptep1.0/2.0 NW_024977934.1 1960 3853 + uncharacterized LOC122273633 aug3.g10673 NA 2e-147
LOC122273715 Ptep1.0/2.0 NW_024978999.1 3091 3469 + tigger transposable element-derived protein 6-like aug3.g10676 NA 1e-128
18 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02