Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453574 Ptep1.0/2.0 NW_024969617.1 51791 90619 + retinoid-inducible serine carboxypeptidase-like aug3.g10840,aug3.g23838 LOC107453574 0
LOC107455033 Ptep1.0/2.0 NW_024969867.1 29661 39951 - uncharacterized LOC107455033 aug3.g10843 LOC107455033 0
LOC107455007 Ptep1.0/2.0 NW_024969867.1 44560 59187 - monocarboxylate transporter 2-like aug3.g10844 LOC107455007 0
LOC107455067 Ptep1.0/2.0 NW_024969867.1 76419 113772 - ras-related protein Rab6 aug3.g10846,aug3.g10845 LOC107455067 0
LOC107455015 Ptep1.0/2.0 NW_024969867.1 113968 131626 + zinc finger protein Xfin aug3.g10847 LOC107455015 0
LOC107455095 Ptep1.0/2.0 NW_024969867.1 147532 169886 - tumor protein p63-regulated gene 1-like protein aug3.g10848,aug3.g24322 LOC107442843,LOC107455095 0
LOC107455077 Ptep1.0/2.0 NW_024969867.1 169934 175735 + ubiA prenyltransferase domain-containing protein 1 homolog aug3.g10849 LOC107455077 0
LOC107445584 Ptep1.0/2.0 NW_024970198.1 493285 503934 + DIS3-like exonuclease 2 aug3.g1084 LOC107445584 0
LOC107454978 Ptep1.0/2.0 NW_024970756.1 7562 54832 - meteorin-like protein aug3.g10841 LOC107454978 0
LOC107454967 Ptep1.0/2.0 NW_024970756.1 61730 85894 + retinoid-inducible serine carboxypeptidase aug3.g10840 LOC107454967 0
LOC107448979 Ptep1.0/2.0 NW_024971110.1 132418 133197 - uncharacterized LOC107448979 aug3.g20550,aug3.g16483,aug3.g10842,aug3.g17302,aug3.g10467 LOC107448979 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02