Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445628 Ptep1.0/2.0 NW_024969645.1 320181 536407 - TNF receptor-associated factor 4 aug3.g1107 LOC107445628 0
LOC107456921 Ptep1.0/2.0 NW_024969987.1 460935 531977 + CD9 antigen aug3.g8947,aug3.g6589,aug3.g15183,aug3.g14221,aug3.g16461,aug3.g9719,aug3.g16641,aug3.g11079 LOC107456921 0
LOC107438401 Ptep1.0/2.0 NW_024970928.1 205513 211411 + cuticle protein 14 aug3.g11075,aug3.g23129 LOC107438401 0
LOC107457315 Ptep1.0/2.0 NW_024971129.1 97992 120404 - dnaJ homolog subfamily C member 21 aug3.g11070 LOC107457315 0
LOC107457321 Ptep1.0/2.0 NW_024971129.1 120492 132113 + uncharacterized LOC107457321 aug3.g11071 LOC107457321 0
LOC107457322 Ptep1.0/2.0 NW_024971129.1 133116 145079 - uncharacterized LOC107457322 aug3.g11072 LOC107457322 0
LOC122268429 Ptep1.0/2.0 NW_024972467.1 21658 22867 - cuticle protein 14-like aug3.g11075 NA 0
LOC107457316 Ptep1.0/2.0 NW_024972592.1 5010 23188 + saccharopine dehydrogenase-like oxidoreductase aug3.g11074 LOC107457316 0
LOC107457325 Ptep1.0/2.0 NW_024972760.1 9509 19075 + uncharacterized LOC107457325 aug3.g11077 LOC107457325 0
LOC122272810 Ptep1.0/2.0 NW_024972894.1 3237 6555 - uncharacterized LOC122272810 aug3.g11074 NA 8e-78
LOC122273146 Ptep1.0/2.0 NW_024974375.1 4132 5866 + uncharacterized LOC122273146 aug3.g11077 NA 2e-64
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02