Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122271065 Ptep1.0/2.0 NW_024970531.1 90723 91325 - uncharacterized LOC122271065 aug3.g6126,aug3.g11344 NA 0
LOC107436133 Ptep1.0/2.0 NW_024970556.1 117519 208242 - substance-P receptor-like aug3.g11346 LOC107436133 0
LOC107436135 Ptep1.0/2.0 NW_024970556.1 248112 294364 - uncharacterized LOC107436135 aug3.g11348 LOC107436135 0
LOC107436118 Ptep1.0/2.0 NW_024970622.1 238313 238987 + gastrula zinc finger protein XlCGF29.1-like aug3.g11340 LOC107436118 0
LOC107436129 Ptep1.0/2.0 NW_024970622.1 246558 260657 - protein gustavus aug3.g11341 LOC107436129 0
LOC107436131 Ptep1.0/2.0 NW_024970622.1 279340 291543 + urease accessory protein UreG aug3.g11342 LOC107436131 0
LOC107445672 Ptep1.0/2.0 NW_024970637.1 91407 107246 - zinc finger protein on ecdysone puffs aug3.g1134 LOC107445672 0
LOC107436134 Ptep1.0/2.0 NW_024971821.1 38159 44805 - lipoprotein lipase aug3.g19435,aug3.g11349 LOC107436134 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02