Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436401 Ptep1.0/2.0 NW_024969724.1 70084 78826 + arrestin, lateral eye-like aug3.g11520 LOC107436401 0
LOC107437176 Ptep1.0/2.0 NW_024969724.1 85402 97905 - dehydrodolichyl diphosphate synthase complex subunit nus1 aug3.g11521 LOC107436402,LOC107437176 0
LOC107436396 Ptep1.0/2.0 NW_024969724.1 98371 130382 + palmitoyltransferase ZDHHC18 aug3.g11522,aug3.g21438 LOC107436396 0
LOC107436405 Ptep1.0/2.0 NW_024969724.1 134038 141763 - transmembrane protein 242 aug3.g11523 LOC107436405 0
LOC107436403 Ptep1.0/2.0 NW_024969724.1 141906 182825 + X-linked retinitis pigmentosa GTPase regulator aug3.g11524 LOC107436403 0
LOC107436406 Ptep1.0/2.0 NW_024969724.1 185414 190483 - transcriptional repressor CTCFL aug3.g11525 LOC107436406 0
LOC122269055 Ptep1.0/2.0 NW_024969724.1 196855 200800 - uncharacterized LOC122269055 aug3.g11527 NA 0
LOC107436397 Ptep1.0/2.0 NW_024969724.1 212446 213353 - zinc finger protein 120-like aug3.g11528 LOC107436397 5e-44
LOC122269051 Ptep1.0/2.0 NW_024969724.1 222228 228713 - zinc finger protein 69-like aug3.g11528 NA 8e-90
LOC107436407 Ptep1.0/2.0 NW_024969724.1 230944 242032 + dual specificity protein phosphatase 14 aug3.g11529 LOC107436407 0
LOC107452517 Ptep1.0/2.0 NW_024970069.1 619420 620181 - uncharacterized LOC107452517 aug3.g4800,aug3.g1152,aug3.g7569 LOC107452517 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02