Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446074 Ptep1.0/2.0 NW_024969638.1 486050 647375 - glypican-5 aug3.g1222 LOC107446074 0
LOC107437342 Ptep1.0/2.0 NW_024969734.1 71312 124490 + uncharacterized LOC107437342 aug3.g12225 LOC107437342 0
LOC107437340 Ptep1.0/2.0 NW_024969734.1 155619 197070 + protein DEK aug3.g12224 LOC107437340 0
LOC107437339 Ptep1.0/2.0 NW_024969734.1 198712 228290 - uncharacterized LOC107437339 aug3.g12223 LOC107437339 0
LOC107448983 Ptep1.0/2.0 NW_024969734.1 232277 871038 - fat-like cadherin-related tumor suppressor homolog aug3.g2512,aug3.g2513,aug3.g21994,aug3.g12222 LOC107453726,LOC107448983 0
LOC107438326 Ptep1.0/2.0 NW_024969996.1 137604 191538 - SEC14-like protein 2 aug3.g12994,aug3.g12220 LOC107438326 0
LOC107437346 Ptep1.0/2.0 NW_024970726.1 22160 27885 - uncharacterized LOC107437346 aug3.g12226 LOC107437346 0
LOC107437347 Ptep1.0/2.0 NW_024970726.1 27988 44106 + serine/threonine-protein kinase PAK 1 aug3.g12227 LOC107437347 0
LOC122268317 Ptep1.0/2.0 NW_024970726.1 51727 66984 - uncharacterized LOC122268317 aug3.g12228 NA 0
LOC107437344 Ptep1.0/2.0 NW_024970726.1 72718 103737 - protein MLP2 aug3.g12228,aug3.g20868,aug3.g20750 LOC107437344,LOC107449673 0
LOC107437348 Ptep1.0/2.0 NW_024970726.1 148989 169103 - TBC1 domain family member 30-like aug3.g12229,aug3.g22425 LOC107437348 0
LOC122273992 Ptep1.0/2.0 NW_024986056.1 484 1234 - glypican-5-like aug3.g1222 NA 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02