Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446076 Ptep1.0/2.0 NW_024969638.1 794972 817921 + acyl-CoA:lysophosphatidylglycerol acyltransferase 1 aug3.g1230,aug3.g1231 LOC107446076 0
LOC107446094 Ptep1.0/2.0 NW_024969638.1 822106 843464 + uncharacterized LOC107446094 aug3.g1231,aug3.g21473 LOC107446094,LOC107451388 0
LOC107437447 Ptep1.0/2.0 NW_024969994.1 104257 177076 - mitogen-activated protein kinase kinase kinase kinase 5 aug3.g12319,aug3.g10184 LOC107437447 0
LOC107437445 Ptep1.0/2.0 NW_024970341.1 8650 87273 + four and a half LIM domains protein 2 aug3.g12316,aug3.g12318 LOC107437444,LOC107437445 0
LOC107437443 Ptep1.0/2.0 NW_024970341.1 111376 194268 - four and a half LIM domains protein 2 aug3.g12315,aug3.g12314 LOC107437443 0
LOC107437439 Ptep1.0/2.0 NW_024970475.1 70094 89766 - Golgi pH regulator aug3.g12310 LOC107437439 0
LOC107437442 Ptep1.0/2.0 NW_024970475.1 92829 102879 - DNA repair protein XRCC2 aug3.g12311 LOC107437442 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02