Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107451387 Ptep1.0/2.0 NW_024969638.1 843458 848104 - V-type proton ATPase subunit D aug3.g1232 LOC107451387 0
LOC122271995 Ptep1.0/2.0 NW_024969647.1 100983 101448 + zinc finger MYM-type protein 6-like aug3.g12320 NA 2e-38
LOC122269828 Ptep1.0/2.0 NW_024969948.1 130507 130969 - protein ZBED8-like aug3.g12320 NA 4e-40
LOC122270124 Ptep1.0/2.0 NW_024970062.1 934727 937249 + uncharacterized LOC122270124 aug3.g12320 NA 6e-58
LOC107437450 Ptep1.0/2.0 NW_024970351.1 290 56568 - cell adhesion molecule-related/down-regulated by oncogenes aug3.g12323 LOC107437450 0
LOC107437451 Ptep1.0/2.0 NW_024970351.1 74430 114850 + protein disabled aug3.g12324 LOC107437451 0
LOC122270928 Ptep1.0/2.0 NW_024970455.1 493082 498658 + uncharacterized LOC122270928 aug3.g12320 NA 1e-38
LOC107437461 Ptep1.0/2.0 NW_024970515.1 7357 146811 + receptor-type tyrosine-protein phosphatase kappa aug3.g12326 LOC107437461 0
LOC107446292 Ptep1.0/2.0 NW_024970515.1 153797 191516 + protein sel-1 homolog 1 aug3.g12327,aug3.g19077 LOC107446292 0
LOC107437470 Ptep1.0/2.0 NW_024971144.1 22700 98486 - Fanconi anemia group A protein homolog aug3.g12329 LOC107437470 0
LOC107437468 Ptep1.0/2.0 NW_024971144.1 98681 126185 + uncharacterized LOC107437468 aug3.g12328,aug3.g18769 LOC107437468 0
LOC122272222 Ptep1.0/2.0 NW_024971651.1 57693 61666 - uncharacterized LOC122272222 aug3.g12320 NA 6e-68
LOC107437459 Ptep1.0/2.0 NW_024971883.1 17177 22980 + RNA 3'-terminal phosphate cyclase-like protein aug3.g12325 LOC107437459 0
LOC122272800 Ptep1.0/2.0 NW_024972869.1 5737 10903 - uncharacterized LOC122272800 aug3.g12329 NA 1e-18
LOC122273292 Ptep1.0/2.0 NW_024975228.1 602 5352 - uncharacterized LOC122273292 aug3.g12326 NA 7e-110
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02