Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446080 Ptep1.0/2.0 NW_024969727.1 155592 168820 - cyclin-dependent kinase 20 aug3.g1238 LOC107446080 0
LOC107437511 Ptep1.0/2.0 NW_024969754.1 84428 85337 + 39S ribosomal protein L43, mitochondrial-like aug3.g12381 LOC107437511 0
LOC107437510 Ptep1.0/2.0 NW_024969754.1 90159 118070 - DNA replication ATP-dependent helicase/nuclease DNA2 aug3.g12380 LOC107437510 0
LOC107437537 Ptep1.0/2.0 NW_024970036.1 125206 126770 - BTB/POZ domain-containing protein At4g08455-like aug3.g12388 LOC107437537 0
LOC107437520 Ptep1.0/2.0 NW_024970595.1 23622 33745 - glycine, alanine and asparagine-rich protein aug3.g12386 LOC107437520 0
LOC107437513 Ptep1.0/2.0 NW_024970595.1 147821 301488 + uncharacterized LOC107437513 aug3.g12383,aug3.g12384 LOC107437513 0
LOC107437512 Ptep1.0/2.0 NW_024970595.1 316720 371618 - E3 ubiquitin-protein ligase SHPRH aug3.g17825,aug3.g12382 LOC107437512 0
LOC122268657 Ptep1.0/2.0 NW_025016534.1 1 441 + uncharacterized LOC122268657 aug3.g12384 NA 5e-50
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02