Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446238 Ptep1.0/2.0 NW_024969733.1 914428 934187 - cysteine/serine-rich nuclear protein 3 aug3.g1279,aug3.g1278 LOC107446238 0
LOC107438078 Ptep1.0/2.0 NW_024970764.1 2014 21311 - protein argonaute-4 aug3.g12797 LOC107438078 0
LOC107438079 Ptep1.0/2.0 NW_024970764.1 26948 45615 - protein argonaute-4 aug3.g12799,aug3.g12798 LOC107438079 0
LOC107438080 Ptep1.0/2.0 NW_024970764.1 54270 75828 - protein argonaute-4 aug3.g12799 LOC107438080 0
LOC107438071 Ptep1.0/2.0 NW_024970782.1 32535 54678 - diacylglycerol lipase-beta aug3.g12790 LOC107438071 0
LOC107438073 Ptep1.0/2.0 NW_024970782.1 71060 143732 - E3 ubiquitin-protein ligase SMURF2 aug3.g12792 LOC107438073 0
LOC107438074 Ptep1.0/2.0 NW_024970782.1 146125 149676 - mitochondrial intermediate peptidase aug3.g12793 LOC107438074 0
LOC107438075 Ptep1.0/2.0 NW_024970782.1 149879 165094 + uncharacterized LOC107438075 aug3.g12794 LOC107438075 0
LOC107438076 Ptep1.0/2.0 NW_024970782.1 171347 178927 - protein argonaute-4 aug3.g12795 LOC107438076 0
LOC107438067 Ptep1.0/2.0 NW_024970782.1 184276 198626 - protein argonaute-4 aug3.g12796 LOC107438067 0
LOC107438077 Ptep1.0/2.0 NW_024970782.1 201265 209683 - protein argonaute-4 aug3.g12796,aug3.g12797 LOC107438077 0
LOC122273773 Ptep1.0/2.0 NW_024980074.1 1284 3038 - protein argonaute-2-like aug3.g12795 LOC107438076 0
LOC122268643 Ptep1.0/2.0 NW_025013591.1 6 731 + protein argonaute-3-like aug3.g12799 NA 0
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02