Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446268 Ptep1.0/2.0 NW_024969884.1 1726 39505 + aryl hydrocarbon receptor nuclear translocator homolog aug3.g1294 LOC107446268 0
LOC107438257 Ptep1.0/2.0 NW_024970043.1 337123 393189 + uncharacterized LOC107438257 aug3.g12943,aug3.g8811 LOC107438257 0
LOC110283238 Ptep1.0/2.0 NW_024970043.1 407427 439010 + uncharacterized LOC110283238 aug3.g12945 LOC110283238 0
LOC107438258 Ptep1.0/2.0 NW_024970043.1 440705 472295 + uncharacterized protein PB18E9.04c aug3.g12945 LOC107438258 0
LOC107438260 Ptep1.0/2.0 NW_024970043.1 474400 524435 + tyrosine-protein kinase Src42A aug3.g12946,aug3.g212 LOC107438260 0
LOC107438261 Ptep1.0/2.0 NW_024970043.1 533033 551046 - uncharacterized LOC107438261 aug3.g12947 LOC107438261 0
LOC107438252 Ptep1.0/2.0 NW_024970043.1 559780 592260 - uncharacterized LOC107438252 aug3.g12949,aug3.g12948 LOC107438252 0
LOC122270084 Ptep1.0/2.0 NW_024970043.1 597727 612028 - uncharacterized LOC122270084 aug3.g12949 NA 0
LOC107438245 Ptep1.0/2.0 NW_024970132.1 494882 508853 + 15-hydroxyprostaglandin dehydrogenase [NAD(+)] aug3.g12941,aug3.g5595,aug3.g12940 LOC107438245 0
LOC122270313 Ptep1.0/2.0 NW_024970132.1 512052 525332 + 15-hydroxyprostaglandin dehydrogenase [NAD(+)]-like aug3.g12940 LOC107438245 0
LOC122272190 Ptep1.0/2.0 NW_024971607.1 59533 63141 - uncharacterized LOC122272190 aug3.g12942 NA 1e-35
LOC122272827 Ptep1.0/2.0 NW_024972965.1 11311 14451 + uncharacterized LOC122272827 aug3.g12942 NA 3e-81
LOC122273485 Ptep1.0/2.0 NW_024976516.1 3301 4882 + uncharacterized LOC122273485 aug3.g12947 NA 4e-75
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02