Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107438904 Ptep1.0/2.0 NW_024969765.1 493204 514404 - zinc finger CCCH domain-containing protein 15 aug3.g13450 LOC107438904 0
LOC107438906 Ptep1.0/2.0 NW_024969765.1 515118 540052 + endoplasmic reticulum resident protein 44 aug3.g13451 LOC107438906 0
LOC122269224 Ptep1.0/2.0 NW_024969765.1 550274 578582 + SEC14 domain and spectrin repeat-containing protein 1-B-like aug3.g13453 NA 0
LOC107439667 Ptep1.0/2.0 NW_024969765.1 582211 963688 + titin aug3.g9683,aug3.g9684,aug3.g9685,aug3.g13454,aug3.g24682,aug3.g13455 LOC107439667 0
LOC107438908 Ptep1.0/2.0 NW_024969922.1 415659 447326 + gonadotropin-releasing hormone II receptor-like aug3.g13457 LOC107441440,LOC107438908 0
LOC107446472 Ptep1.0/2.0 NW_024969965.1 420112 501485 - allatostatin-A receptor aug3.g1345 LOC107446472 0
LOC107438912 Ptep1.0/2.0 NW_024970849.1 501336 616988 + mucin-17 aug3.g13459 LOC107438912 0
LOC107442949 Ptep1.0/2.0 NW_024970849.1 620245 648989 - corticotropin-releasing factor-binding protein aug3.g27796,aug3.g13458 LOC107442949 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02