Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446499 Ptep1.0/2.0 NW_024969626.1 1346234 1547337 + synaptogenesis protein syg-2 aug3.g1348 LOC107446499 0
LOC107438957 Ptep1.0/2.0 NW_024969752.1 3152627 3168121 + uncharacterized LOC107438957 aug3.g13486 LOC107438957 0
LOC107438958 Ptep1.0/2.0 NW_024969752.1 3169609 3217527 - cAMP-dependent protein kinase type II regulatory subunit aug3.g13487 LOC107438958 0
LOC107438948 Ptep1.0/2.0 NW_024969835.1 314230 529731 + rhomboid-related protein 2 aug3.g13482 LOC107438948 0
LOC107438952 Ptep1.0/2.0 NW_024969835.1 530940 549992 - protein Njmu-R1 aug3.g13483 LOC107438952 0
LOC107438951 Ptep1.0/2.0 NW_024969835.1 550208 565448 + probable global transcription activator SNF2L2 aug3.g13484,aug3.g18914 LOC107438951 0
LOC122269489 Ptep1.0/2.0 NW_024969835.1 571471 604546 + uncharacterized LOC122269489 aug3.g21284,aug3.g13485 NA 0
LOC107438960 Ptep1.0/2.0 NW_024970440.1 485659 486503 + translationally-controlled tumor protein homolog aug3.g13489 LOC107438960 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02