Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443167 Ptep1.0/2.0 NW_024969910.1 155334 156461 - uncharacterized LOC107443167 aug3.g27863,aug3.g6023,aug3.g13969 LOC107443167 0
LOC107439688 Ptep1.0/2.0 NW_024969978.1 249294 251721 + uncharacterized LOC107439688 aug3.g13968,aug3.g27864 LOC107439688 0
LOC107439692 Ptep1.0/2.0 NW_024969978.1 254875 266804 - TD and POZ domain-containing protein 3 aug3.g13967,aug3.g13966 LOC107439692 0
LOC107439693 Ptep1.0/2.0 NW_024969978.1 266964 290065 + protein ABHD11 aug3.g13965 LOC107439693 0
LOC107439691 Ptep1.0/2.0 NW_024969978.1 291724 296400 - uncharacterized LOC107439691 aug3.g13964 LOC107439691 0
LOC107439690 Ptep1.0/2.0 NW_024969978.1 306674 321620 - protein ABHD11-like aug3.g13964 LOC107439690 0
LOC122268311 Ptep1.0/2.0 NW_024969978.1 322164 325165 - uncharacterized LOC122268311 aug3.g13963 NA 0
LOC107454825 Ptep1.0/2.0 NW_024970583.1 486707 495760 - uncharacterized LOC107454825 aug3.g6576,aug3.g13963 LOC107454825 0
LOC107446595 Ptep1.0/2.0 NW_024971095.1 21390 66611 + uncharacterized LOC107446595 aug3.g1396 LOC107446595 0
LOC107439676 Ptep1.0/2.0 NW_024971165.1 7611 11865 - gastrula zinc finger protein XlCGF71.1 aug3.g13960 LOC107439676 0
LOC107439677 Ptep1.0/2.0 NW_024971690.1 49304 62484 - uncharacterized LOC107439677 aug3.g13962 LOC107439677 8e-110
LOC107451168 Ptep1.0/2.0 NW_024972153.1 5175 27290 - uncharacterized LOC107451168 aug3.g3753,aug3.g13961 LOC107451168 2e-38
LOC122272540 Ptep1.0/2.0 NW_024972203.1 3532 11172 - uncharacterized LOC122272540 aug3.g13962 NA 0
LOC122272738 Ptep1.0/2.0 NW_024972692.1 4801 5938 + uncharacterized LOC122272738 aug3.g13962 NA 6e-62
LOC122272888 Ptep1.0/2.0 NW_024973201.1 2050 11536 - E3 ubiquitin-protein ligase RNF220-like aug3.g13962 NA 3e-108
LOC122273613 Ptep1.0/2.0 NW_024977720.1 2565 4131 - uncharacterized LOC122273613 aug3.g13961,aug3.g1296 NA 0
16 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02