Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122269138 Ptep1.0/2.0 NW_024969746.1 2005771 2006115 + uncharacterized LOC122269138 aug3.g14045 NA 3e-174
LOC107439775 Ptep1.0/2.0 NW_024969772.1 277630 288376 - amino acid transporter AVT1J-like aug3.g14040 LOC107439775 0
LOC107439773 Ptep1.0/2.0 NW_024969772.1 309809 324415 + protein ABHD11-like aug3.g14041 LOC107439773 0
LOC107439778 Ptep1.0/2.0 NW_024969772.1 326191 359979 + transmembrane channel-like protein 7 aug3.g14042,aug3.g14043 LOC107439778 0
LOC107439779 Ptep1.0/2.0 NW_024969772.1 363217 400304 - histone deacetylase complex subunit SAP130 aug3.g14043 LOC107439779 0
LOC107439774 Ptep1.0/2.0 NW_024969772.1 414498 417094 + uncharacterized LOC107439774 aug3.g14046 LOC107439774 0
LOC122269615 Ptep1.0/2.0 NW_024969874.1 429013 429357 + uncharacterized LOC122269615 aug3.g14045 NA 3e-174
LOC122269699 Ptep1.0/2.0 NW_024969898.1 4800184 4800528 + uncharacterized LOC122269699 aug3.g14045 NA 3e-169
LOC122269952 Ptep1.0/2.0 NW_024969992.1 253973 254314 - uncharacterized LOC122269952 aug3.g14045 NA 9e-160
LOC122270434 Ptep1.0/2.0 NW_024970182.1 175039 175383 + uncharacterized LOC122270434 aug3.g14045 NA 7e-161
LOC122270515 Ptep1.0/2.0 NW_024970221.1 455554 455898 - uncharacterized LOC122270515 aug3.g14045 NA 3e-174
LOC107446587 Ptep1.0/2.0 NW_024970382.1 225 85961 - piezo-type mechanosensitive ion channel component 2 aug3.g5377,aug3.g1404,aug3.g22136,aug3.g15843,aug3.g24236 LOC107454447,LOC107453298,LOC107446587 0
LOC107439787 Ptep1.0/2.0 NW_024970518.1 19500 20079 - elongin-C-like aug3.g14048 LOC107439787 0
LOC107439793 Ptep1.0/2.0 NW_024970518.1 20208 34579 + rRNA-processing protein FCF1 homolog aug3.g14049 LOC107439793 3e-113
LOC122271654 Ptep1.0/2.0 NW_024971026.1 63725 64069 + uncharacterized LOC122271654 aug3.g14045 NA 3e-174
LOC122273230 Ptep1.0/2.0 NW_024974839.1 3664 6593 - uncharacterized LOC122273230 aug3.g14047 NA 0
16 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02