Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107440223 Ptep1.0/2.0 NW_024969624.1 653642 674021 + uncharacterized LOC107440223 aug3.g14367 LOC107440223,LOC107440519 0
LOC107440225 Ptep1.0/2.0 NW_024969624.1 679502 705491 - paired mesoderm homeobox protein 2 aug3.g14368 LOC107440225 0
LOC107440224 Ptep1.0/2.0 NW_024969624.1 798272 833635 + uncharacterized LOC107440224 aug3.g14369 LOC107440224 0
LOC107440641 Ptep1.0/2.0 NW_024969624.1 838428 918918 - collagen alpha-1(XXII) chain aug3.g9773,aug3.g14370 LOC107440641 0
LOC107445939 Ptep1.0/2.0 NW_024969635.1 1051624 1073685 - zinc finger RNA-binding protein aug3.g143 LOC107445939 0
LOC107440110 Ptep1.0/2.0 NW_024969675.1 737933 764627 - 40-kDa huntingtin-associated protein aug3.g14271,aug3.g9818,aug3.g14231,aug3.g12670,aug3.g7979,aug3.g20627,aug3.g14384,aug3.g1350,aug3.g27662,aug3.g8721,aug3.g20462,aug3.g23430,aug3.g7037,aug3.g26629,aug3.g5368,aug3.g8439,aug3.g9624,aug3.g7249,aug3.g5894,aug3.g15802,aug3.g6860,aug3.g2105,aug LOC107440110 0
LOC122268866 Ptep1.0/2.0 NW_024969694.1 1245590 1254716 - uncharacterized LOC122268866 aug3.g21862,aug3.g14311,aug3.g8689 NA 0
LOC107446563 Ptep1.0/2.0 NW_024969717.1 1016093 1070999 + acyl-coenzyme A synthetase ACSM3, mitochondrial aug3.g19268,aug3.g14363 LOC107446563 0
LOC107440209 Ptep1.0/2.0 NW_024969726.1 2949381 3234805 + uncharacterized LOC107440209 aug3.g14352,aug3.g14701 LOC107440209 0
LOC107440206 Ptep1.0/2.0 NW_024969726.1 3252740 3254084 + nicotinamidase-like aug3.g14351 LOC107440206 0
LOC107440207 Ptep1.0/2.0 NW_024969726.1 3258183 3276699 - transmembrane protein 33 aug3.g14350,aug3.g14349,aug3.g23102 LOC107440207 0
LOC107440208 Ptep1.0/2.0 NW_024969726.1 3276979 3282854 + glycolipid transfer protein aug3.g14348 LOC107440208 0
LOC107440205 Ptep1.0/2.0 NW_024969726.1 3285371 3295864 - transaldolase aug3.g14347 LOC107440205 0
LOC107440210 Ptep1.0/2.0 NW_024969726.1 3306184 3319516 + very-long-chain 3-oxoacyl-CoA reductase aug3.g14346 LOC107440210 0
LOC107440204 Ptep1.0/2.0 NW_024969726.1 3324305 3340774 - putative neutral sphingomyelinase aug3.g14345 LOC107440204 0
LOC107440211 Ptep1.0/2.0 NW_024969738.1 236589 240212 - apoptosis regulator R11 aug3.g14353 LOC107440211 0
LOC107440214 Ptep1.0/2.0 NW_024969738.1 242045 258246 + synaptophysin-like protein 1 aug3.g14354 LOC107440214 0
LOC122269123 Ptep1.0/2.0 NW_024969742.1 1398389 1400176 - general transcription factor II-I repeat domain-containing protein 2-like aug3.g14377 NA 0
LOC107444016 Ptep1.0/2.0 NW_024969765.1 348765 408470 - uncharacterized LOC107444016 aug3.g17613,aug3.g23084,aug3.g5536,aug3.g715,aug3.g12559,aug3.g4135,aug3.g10940,aug3.g27929,aug3.g11329,aug3.g5784,aug3.g21693,aug3.g18243,aug3.g1982,aug3.g24226,aug3.g7007,aug3.g691,aug3.g4537,aug3.g23563,aug3.g20932,aug3.g1220,aug3.g2490,aug3.g14337,aug LOC107444016,LOC107438385 0
LOC107440262 Ptep1.0/2.0 NW_024969779.1 637225 642213 + NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 aug3.g14397 LOC107440262 0
LOC107440258 Ptep1.0/2.0 NW_024969779.1 648147 682658 - ankyrin repeat and IBR domain-containing protein 1 aug3.g14395,aug3.g14396 LOC107440258 0
LOC107440259 Ptep1.0/2.0 NW_024969779.1 682797 696934 + tRNA-dihydrouridine(20) synthase [NAD(P)+]-like aug3.g14394 LOC107440259 0
LOC122269266 Ptep1.0/2.0 NW_024969779.1 704416 706103 + uncharacterized LOC122269266 aug3.g14394 NA 6e-108
LOC107440219 Ptep1.0/2.0 NW_024969782.1 759023 1007825 + protein artichoke aug3.g14361 LOC107440219 0
LOC122269294 Ptep1.0/2.0 NW_024969782.1 1007873 1013774 + uncharacterized LOC122269294 aug3.g14361 NA 0
LOC122269338 Ptep1.0/2.0 NW_024969791.1 272650 273021 + uncharacterized LOC122269338 aug3.g16367,aug3.g26851,aug3.g18653,aug3.g15757,aug3.g14342,aug3.g23728,aug3.g11654,aug3.g25539,aug3.g17572,aug3.g12129,aug3.g16760,aug3.g10418,aug3.g1935 NA 0
LOC107454743 Ptep1.0/2.0 NW_024969796.1 798099 812750 - nucleoporin p54 aug3.g6504,aug3.g14357 LOC107454743 0
LOC107440216 Ptep1.0/2.0 NW_024969796.1 936241 970389 + uncharacterized LOC107440216 aug3.g14359 LOC107440216 0
LOC107450521 Ptep1.0/2.0 NW_024969796.1 979669 1004719 - glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 aug3.g21223,aug3.g14360,aug3.g24694,aug3.g24563 LOC107450521,LOC107444344 0
LOC110282168 Ptep1.0/2.0 NW_024969837.1 770536 776996 + partner of bursicon aug3.g14320 LOC110282168 2e-154
LOC107440179 Ptep1.0/2.0 NW_024969837.1 852495 890987 - NACHT and WD repeat domain-containing protein 2 aug3.g14322 LOC107440179 0
LOC107440264 Ptep1.0/2.0 NW_024969848.1 11564 38985 + uncharacterized LOC107440264 aug3.g14398 LOC107440264 0
LOC107436528 Ptep1.0/2.0 NW_024969848.1 78720 118711 - TBC1 domain family member 2B aug3.g26049,aug3.g14399 LOC107436528 0
LOC107446709 Ptep1.0/2.0 NW_024969854.1 788366 793248 + RNA guanine-N7 methyltransferase activating subunit aug3.g1439 LOC107446709 0
LOC122269539 Ptep1.0/2.0 NW_024969854.1 797029 807550 - chromodomain-helicase-DNA-binding protein 1-like aug3.g1438 LOC107446684 0
LOC107446684 Ptep1.0/2.0 NW_024969854.1 809509 856638 - chromodomain-helicase-DNA-binding protein 1 aug3.g1438 LOC107446684 0
LOC107446697 Ptep1.0/2.0 NW_024969854.1 858076 878314 - 28S ribosomal protein S11, mitochondrial aug3.g1437 LOC107446697 0
LOC107440203 Ptep1.0/2.0 NW_024969897.1 702602 745608 - lens fiber major intrinsic protein aug3.g14343 LOC107440203 0
LOC122269689 Ptep1.0/2.0 NW_024969897.1 871435 871753 + uncharacterized LOC122269689 aug3.g14342 NA 8e-165
LOC122269740 Ptep1.0/2.0 NW_024969911.1 17036 17202 + U2 spliceosomal RNA aug3.g14313 NA 4e-21
LOC107439995 Ptep1.0/2.0 NW_024969988.1 2355026 2355898 - general transcription factor II-I repeat domain-containing protein 2B-like aug3.g44,aug3.g19402,aug3.g14377,aug3.g22016,aug3.g22277,aug3.g20287 LOC107439995 0
LOC122270009 Ptep1.0/2.0 NW_024970012.1 923094 936645 - uncharacterized LOC122270009 aug3.g14315 NA 0
LOC122270100 Ptep1.0/2.0 NW_024970048.1 440659 441795 - general transcription factor II-I repeat domain-containing protein 2-like aug3.g14377 NA 0
LOC107439431 Ptep1.0/2.0 NW_024970170.1 25699 26427 + E3 SUMO-protein ligase ZBED1-like aug3.g14302 LOC107439431 0
LOC107446698 Ptep1.0/2.0 NW_024970221.1 12194 21632 + proline-rich protein PRCC aug3.g1436 LOC107446698 0
LOC107446710 Ptep1.0/2.0 NW_024970221.1 26607 92314 - neuroglobin aug3.g1435 LOC107446710 0
LOC107446683 Ptep1.0/2.0 NW_024970221.1 111135 111524 - leucine-rich repeat extensin-like protein 3 aug3.g1434 LOC107446683 2e-172
LOC122270516 Ptep1.0/2.0 NW_024970221.1 111758 115390 + uncharacterized LOC122270516 aug3.g1434 NA 7e-127
LOC107446694 Ptep1.0/2.0 NW_024970221.1 131222 140596 + uncharacterized LOC107446694 aug3.g1433 LOC107446694 0
LOC107446681 Ptep1.0/2.0 NW_024970221.1 159438 167085 - glycine-rich cell wall structural protein aug3.g1432 LOC107446681 0
LOC107446705 Ptep1.0/2.0 NW_024970221.1 232546 251863 + protein Lines homolog 1 aug3.g1431 LOC107446705 0
LOC122270514 Ptep1.0/2.0 NW_024970221.1 242179 246415 - uncharacterized LOC122270514 aug3.g1431 NA 3e-40
LOC107446702 Ptep1.0/2.0 NW_024970221.1 262193 325149 - uncharacterized LOC107446702 aug3.g1429,aug3.g1430 LOC107446702 0
LOC122270622 Ptep1.0/2.0 NW_024970280.1 33284 35149 - uncharacterized LOC122270622 aug3.g16123,aug3.g14317 NA 0
LOC122270766 Ptep1.0/2.0 NW_024970359.1 353200 354426 + uncharacterized LOC122270766 aug3.g14340 NA 0
LOC122270767 Ptep1.0/2.0 NW_024970359.1 354561 355424 + ATP-dependent DNA helicase pif1-like aug3.g14340 NA 0
LOC107449221 Ptep1.0/2.0 NW_024970362.1 338962 343385 + uncharacterized LOC107449221 aug3.g14314 LOC107449221 4e-37
LOC122270849 Ptep1.0/2.0 NW_024970406.1 185721 186788 - general transcription factor II-I repeat domain-containing protein 2-like aug3.g14377 NA 0
LOC107440250 Ptep1.0/2.0 NW_024970518.1 363463 386671 + uncharacterized LOC107440250 aug3.g20967,aug3.g14385,aug3.g9598 LOC107440250 0
LOC107440221 Ptep1.0/2.0 NW_024970527.1 396018 423997 - low-density lipoprotein receptor-related protein 1 aug3.g14366 LOC107440221 0
LOC122271068 Ptep1.0/2.0 NW_024970531.1 108091 110411 + uncharacterized LOC122271068 aug3.g14312 NA 0
LOC107436711 Ptep1.0/2.0 NW_024970631.1 188811 192925 - E3 SUMO-protein ligase ZBED1 aug3.g22954,aug3.g13777,aug3.g22569,aug3.g12524,aug3.g14302 LOC107436711 0
LOC122271197 Ptep1.0/2.0 NW_024970634.1 20138 21205 - general transcription factor II-I repeat domain-containing protein 2-like aug3.g14377 NA 0
LOC107449682 Ptep1.0/2.0 NW_024970717.1 142291 192440 + cysteine--tRNA ligase, cytoplasmic aug3.g20871,aug3.g21481,aug3.g14390 LOC107449682 0
LOC122271311 Ptep1.0/2.0 NW_024970717.1 194364 214961 - uncharacterized LOC122271311 aug3.g14391 NA 0
LOC107440240 Ptep1.0/2.0 NW_024970743.1 104190 175589 - protein patched-like aug3.g14374 LOC107440240 0
LOC122271362 Ptep1.0/2.0 NW_024970754.1 15908 18349 + uncharacterized LOC122271362 aug3.g14309 NA 7e-88
LOC107440236 Ptep1.0/2.0 NW_024970906.1 6992 43445 - caprin-1 aug3.g14372 LOC107440236 0
LOC107440235 Ptep1.0/2.0 NW_024970906.1 43829 90273 + dual specificity mitogen-activated protein kinase kinase 4 aug3.g17587,aug3.g14371 LOC107440235 0
LOC107457233 Ptep1.0/2.0 NW_024970928.1 1754 84945 - maestro heat-like repeat-containing protein family member 1 aug3.g10999,aug3.g14300,aug3.g3274 LOC107440164,LOC107457233 0
LOC107440161 Ptep1.0/2.0 NW_024970928.1 85140 112281 + protein downstream neighbor of son homolog aug3.g14301 LOC107440161 0
LOC107440163 Ptep1.0/2.0 NW_024970928.1 143192 155088 + uncharacterized LOC107440163 aug3.g14303 LOC107440163 0
LOC107440165 Ptep1.0/2.0 NW_024970928.1 160667 170223 - uncharacterized LOC107440165 aug3.g14304 LOC107440165 0
LOC122271554 Ptep1.0/2.0 NW_024970928.1 183723 191868 - uncharacterized LOC122271554 aug3.g14305 NA 0
LOC107440173 Ptep1.0/2.0 NW_024970996.1 7083 46141 + protein lingerer aug3.g14312 LOC107440173 0
LOC122271626 Ptep1.0/2.0 NW_024970996.1 153171 156834 - uncharacterized LOC122271626 aug3.g14319,aug3.g12507,aug3.g2063 NA 0
LOC107440199 Ptep1.0/2.0 NW_024971029.1 37262 44861 - uncharacterized LOC107440199 aug3.g14335 LOC107440199 0
LOC107440197 Ptep1.0/2.0 NW_024971029.1 50009 56757 - uncharacterized LOC107440197 aug3.g14334 LOC107440197 1e-154
LOC107440419 Ptep1.0/2.0 NW_024971029.1 70414 76105 - uncharacterized LOC107440419 aug3.g14334 LOC107440419 1e-124
LOC107440198 Ptep1.0/2.0 NW_024971029.1 84803 89246 - uncharacterized LOC107440198 aug3.g14332 LOC107440198 0
LOC107440195 Ptep1.0/2.0 NW_024971029.1 115401 138003 - N-acetylgalactosamine kinase aug3.g14331 LOC107440195 0
LOC110283536 Ptep1.0/2.0 NW_024971058.1 4206 7762 - uncharacterized LOC110283536 aug3.g14382,aug3.g15913,aug3.g14383,aug3.g15914 LOC110283536 0
LOC107437016 Ptep1.0/2.0 NW_024971086.1 4606 18463 + uncharacterized LOC107437016 aug3.g11976,aug3.g14381 LOC107437016 0
LOC122271817 Ptep1.0/2.0 NW_024971183.1 42355 42726 + protein FAM200B-like aug3.g14339 NA 8e-161
LOC107440248 Ptep1.0/2.0 NW_024971267.1 97287 98303 + general transcription factor II-I repeat domain-containing protein 2-like aug3.g14377,aug3.g7118,aug3.g614,aug3.g14185,aug3.g5647 LOC107440248 0
LOC107440192 Ptep1.0/2.0 NW_024971298.1 4429 5157 - uncharacterized LOC107440192 aug3.g14324,aug3.g21676 LOC107440192 0
LOC122271927 Ptep1.0/2.0 NW_024971298.1 6182 9475 + uncharacterized LOC122271927 aug3.g14325,aug3.g13633 NA 0
LOC107440193 Ptep1.0/2.0 NW_024971298.1 12319 13590 - uncharacterized protein F54H12.2-like aug3.g14326,aug3.g2099 LOC107440193 0
LOC107440194 Ptep1.0/2.0 NW_024971298.1 37025 72217 - flocculation protein FLO11-like aug3.g14327 LOC107440194 0
LOC107440167 Ptep1.0/2.0 NW_024971586.1 66455 88186 + uncharacterized LOC107440167 aug3.g14306 LOC107440167 7e-55
LOC107440253 Ptep1.0/2.0 NW_024971610.1 17773 32612 + negative elongation factor B aug3.g14389 LOC107440253 0
LOC107440252 Ptep1.0/2.0 NW_024971610.1 38911 60439 + DNA repair protein RAD51 homolog 3 aug3.g14388 LOC107440252 0
LOC107440251 Ptep1.0/2.0 NW_024971610.1 64660 69928 + small nuclear ribonucleoprotein E aug3.g14387 LOC107440251 0
LOC122272219 Ptep1.0/2.0 NW_024971646.1 28322 29389 - general transcription factor II-I repeat domain-containing protein 2-like aug3.g14377 NA 0
LOC122272234 Ptep1.0/2.0 NW_024971660.1 46820 50472 + uncharacterized LOC122272234 aug3.g14381 LOC107440246 1e-175
LOC107441795 Ptep1.0/2.0 NW_024971697.1 29044 31296 - putative 115 kDa protein in type-1 retrotransposable element R1DM aug3.g1255,aug3.g4097,aug3.g14315,aug3.g2064,aug3.g20033 LOC107441795 0
LOC107444197 Ptep1.0/2.0 NW_024971970.1 691 4482 + uncharacterized LOC107444197 aug3.g14364 LOC107444197 1e-159
LOC122272440 Ptep1.0/2.0 NW_024972015.1 22104 23681 - general transcription factor II-I repeat domain-containing protein 2-like aug3.g14377 NA 0
LOC107440255 Ptep1.0/2.0 NW_024972083.1 6157 12082 - uncharacterized LOC107440255 aug3.g14386,aug3.g27084,aug3.g3598 LOC107440255 0
LOC122272482 Ptep1.0/2.0 NW_024972083.1 18803 25043 + uncharacterized LOC122272482 aug3.g14385 NA 0
LOC122272503 Ptep1.0/2.0 NW_024972134.1 19728 29977 + uncharacterized LOC122272503 aug3.g14300 NA 2e-69
LOC107440244 Ptep1.0/2.0 NW_024972638.1 12308 22629 + venom peptide SjAPI-2 aug3.g14379 LOC107440244 0
LOC122272839 Ptep1.0/2.0 NW_024973016.1 7055 8071 - general transcription factor II-I repeat domain-containing protein 2-like aug3.g14377 NA 0
LOC122272912 Ptep1.0/2.0 NW_024973285.1 2813 9421 - low-density lipoprotein receptor-like aug3.g14366 NA 5e-141
LOC107440249 Ptep1.0/2.0 NW_024973290.1 78 9293 - uncharacterized LOC107440249 aug3.g14381 LOC107440249 3e-83
LOC122272919 Ptep1.0/2.0 NW_024973303.1 3933 5151 + uncharacterized LOC122272919 aug3.g14383 NA 0
LOC122272988 Ptep1.0/2.0 NW_024973613.1 1788 10789 + NACHT and WD repeat domain-containing protein 2-like aug3.g14322 NA 2e-108
LOC107440202 Ptep1.0/2.0 NW_024973948.1 473 3237 - uncharacterized LOC107440202 aug3.g14340,aug3.g14773,aug3.g6598,aug3.g23440,aug3.g24567,aug3.g21435 LOC107440202 0
LOC122273192 Ptep1.0/2.0 NW_024974618.1 914 3337 + uncharacterized LOC122273192 aug3.g14309 NA 3e-101
LOC122273503 Ptep1.0/2.0 NW_024976736.1 672 2372 + uncharacterized LOC122273503 aug3.g14309 NA 7e-88
LOC122273522 Ptep1.0/2.0 NW_024976898.1 1592 4085 - uncharacterized LOC122273522 aug3.g14390 NA 3e-62
LOC122273597 Ptep1.0/2.0 NW_024977629.1 2405 3163 + uncharacterized LOC122273597 aug3.g14340 NA 4e-161
LOC122273598 Ptep1.0/2.0 NW_024977629.1 3309 4056 + ATP-dependent DNA helicase pif1-like aug3.g14340 NA 0
LOC107440246 Ptep1.0/2.0 NW_024977658.1 1754 3448 - uncharacterized LOC107440246 aug3.g14381 LOC107440246 2e-96
LOC122273618 Ptep1.0/2.0 NW_024977794.1 3098 3621 + uncharacterized LOC122273618 aug3.g14325 NA 0
LOC122268682 Ptep1.0/2.0 NW_025020271.1 1 277 + uncharacterized LOC122268682 aug3.g14348 NA 5e-64
LOC107440191 Ptep1.0/2.0 NW_025021148.1 73483 88109 + uncharacterized LOC107440191 aug3.g14328 LOC107440191 0
117 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02