Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446842 Ptep1.0/2.0 NW_024969795.1 332945 409367 + uncharacterized LOC107446842 aug3.g1487,aug3.g1486 LOC107446842 0
LOC107440873 Ptep1.0/2.0 NW_024970204.1 244371 401468 + synaptogenesis protein syg-1-like aug3.g14877,aug3.g14878 LOC107440873,LOC107440874 0
LOC107446343 Ptep1.0/2.0 NW_024970244.1 227862 264076 - uncharacterized LOC107446343 aug3.g24917,aug3.g24436,aug3.g14872 LOC107446343 0
LOC107440866 Ptep1.0/2.0 NW_024970244.1 370435 398287 - E3 ubiquitin-protein ligase arih1 aug3.g14874 LOC107440866 0
LOC107440867 Ptep1.0/2.0 NW_024970244.1 398494 402310 + MIT domain-containing protein 1 aug3.g14875,aug3.g14876 LOC107440867 0
LOC107440869 Ptep1.0/2.0 NW_024970244.1 408016 450534 - uncharacterized LOC107440869 aug3.g14876 LOC107440869,LOC110282334 0
LOC107445167 Ptep1.0/2.0 NW_024971547.1 1937 2464 - uncharacterized LOC107445167 aug3.g24696,aug3.g14871 LOC107445167 0
LOC107440863 Ptep1.0/2.0 NW_024971547.1 6583 22746 + methionyl-tRNA formyltransferase, mitochondrial aug3.g14870 LOC107440863 0
LOC107440877 Ptep1.0/2.0 NW_024975204.1 86 3549 - uncharacterized LOC107440877 aug3.g14879 LOC107440877 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02