Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122268224 Ptep1.0/2.0 NW_024969797.1 559481 585352 + putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 aug3.g1506 LOC107446879 0
LOC107446879 Ptep1.0/2.0 NW_024969797.1 590114 615930 + putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 aug3.g1505,aug3.g1506 LOC107446879 0
LOC122269536 Ptep1.0/2.0 NW_024969853.1 516929 522656 + uncharacterized LOC122269536 aug3.g15064 NA 1e-18
LOC107441121 Ptep1.0/2.0 NW_024970056.1 259488 369972 + BAI1-associated protein 3-like aug3.g15062,aug3.g15061 LOC107441121,LOC107452772 0
LOC107437085 Ptep1.0/2.0 NW_024970056.1 381175 499528 - neurogenic protein big brain aug3.g12034,aug3.g15063 LOC107437085 0
LOC122270933 Ptep1.0/2.0 NW_024970459.1 116921 118803 - uncharacterized LOC122270933 aug3.g15060,aug3.g10465 NA 0
LOC107441124 Ptep1.0/2.0 NW_024970679.1 26977 59299 + flavin-containing monooxygenase 5 aug3.g15065,aug3.g21636,aug3.g21661 LOC107441124 0
LOC107441125 Ptep1.0/2.0 NW_024970679.1 69303 96143 + probable arginine--tRNA ligase, mitochondrial aug3.g22649,aug3.g15067,aug3.g15066 LOC107441125 0
LOC122271263 Ptep1.0/2.0 NW_024970679.1 99854 121426 + uncharacterized LOC122271263 aug3.g15068,aug3.g20794 NA 0
LOC107452996 Ptep1.0/2.0 NW_024970787.1 399179 400486 - uncharacterized LOC107452996 aug3.g5130,aug3.g15060 LOC107452996 0
LOC122272335 Ptep1.0/2.0 NW_024971823.1 29360 30127 + uncharacterized LOC122272335 aug3.g15060 NA 0
LOC122273531 Ptep1.0/2.0 NW_024976999.1 51 783 + uncharacterized LOC122273531 aug3.g15060 NA 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02