Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107450142 Ptep1.0/2.0 NW_024970101.1 580456 586350 - uncharacterized LOC107450142 aug3.g3146,aug3.g3145,aug3.g1513 LOC107450142 0
LOC107441220 Ptep1.0/2.0 NW_024970176.1 69901 80564 - heterogeneous nuclear ribonucleoprotein A/B aug3.g15130 LOC107441220 0
LOC107441224 Ptep1.0/2.0 NW_024970176.1 99263 116706 - uncharacterized histidine-rich protein DDB_G0274557-like aug3.g15131 LOC107441224 0
LOC107441226 Ptep1.0/2.0 NW_024970176.1 129190 133652 - protein hunchback-like aug3.g15132 LOC107441226 0
LOC107441223 Ptep1.0/2.0 NW_024970176.1 139903 157075 - uncharacterized LOC107441223 aug3.g15133 LOC107441223 0
LOC107441222 Ptep1.0/2.0 NW_024970176.1 166013 183595 - uncharacterized LOC107441222 aug3.g15134 LOC107441222 0
LOC122270422 Ptep1.0/2.0 NW_024970176.1 223572 231347 + uncharacterized LOC122270422 aug3.g15136 NA 2e-172
LOC122270417 Ptep1.0/2.0 NW_024970176.1 234733 237976 - progranulin-like aug3.g15137 LOC107441215 0
LOC107441213 Ptep1.0/2.0 NW_024970176.1 310498 326371 + protein ABHD11 aug3.g15139 LOC107441213 0
LOC107441215 Ptep1.0/2.0 NW_024975206.1 2277 4137 + uncharacterized LOC107441215 aug3.g15137 LOC107441215 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02