Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107449898 Ptep1.0/2.0 NW_024969886.1 217290 238475 - parafibromin aug3.g15509 LOC107449898 0
LOC107449894 Ptep1.0/2.0 NW_024969886.1 239034 252794 + putative leucine-rich repeat-containing protein DDB_G0290503 aug3.g15508 LOC107449894 0
LOC107449893 Ptep1.0/2.0 NW_024969886.1 256660 282155 - phosphatidylserine lipase ABHD16A aug3.g15507 LOC107449893 0
LOC107449884 Ptep1.0/2.0 NW_024969886.1 366019 366333 + notch-regulated ankyrin repeat-containing protein-like aug3.g15506 LOC107449884 6e-166
LOC107449896 Ptep1.0/2.0 NW_024969886.1 390195 463656 - sarcosine dehydrogenase, mitochondrial aug3.g15505 LOC107449896 0
LOC107449900 Ptep1.0/2.0 NW_024969886.1 470873 487569 - uncharacterized LOC107449900 aug3.g15504 LOC107449900 0
LOC107449904 Ptep1.0/2.0 NW_024969886.1 487723 501492 + nicolin-1 aug3.g15503 LOC110282293,LOC107449904 0
LOC107449895 Ptep1.0/2.0 NW_024969886.1 502648 630393 - uncharacterized LOC107449895 aug3.g15502 LOC107449895 0
LOC122269642 Ptep1.0/2.0 NW_024969886.1 648958 680292 + probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550 aug3.g15500 NA 0
LOC107446968 Ptep1.0/2.0 NW_024971254.1 109467 223561 + glutamate receptor ionotropic, NMDA 2B aug3.g1550 LOC107446968 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02