Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444110 Ptep1.0/2.0 NW_024969740.1 36490 37140 + uncharacterized LOC107444110 aug3.g17632,aug3.g15930,aug3.g14568 LOC107444110 0
LOC107436885 Ptep1.0/2.0 NW_024970215.1 67424 142068 + prodigiosin synthesizing transferase PigC aug3.g11904,aug3.g14154,aug3.g14155,aug3.g15937,aug3.g18169 LOC107436885 0
LOC107439953 Ptep1.0/2.0 NW_024970656.1 327491 362579 + uncharacterized LOC107439953 aug3.g14154,aug3.g15938,aug3.g21320,aug3.g13630 LOC107439953 0
LOC107441460 Ptep1.0/2.0 NW_024971108.1 13208 36588 + trimeric intracellular cation channel type 1B.1 aug3.g15931 LOC107441460 0
LOC107441461 Ptep1.0/2.0 NW_024971108.1 56034 85579 - probable very-long-chain enoyl-CoA reductase art-1 aug3.g15932 LOC107441461 0
LOC107441462 Ptep1.0/2.0 NW_024971108.1 90961 92049 - uncharacterized LOC107441462 aug3.g12062,aug3.g15933 LOC107441462 0
LOC107447068 Ptep1.0/2.0 NW_024971275.1 27855 58423 - short-chain dehydrogenase/reductase family 16C member 6 aug3.g1593 LOC107447068 0
LOC107444890 Ptep1.0/2.0 NW_024971611.1 1063 46649 + putative phosphoenolpyruvate synthase aug3.g14154,aug3.g15939 LOC107444890 0
LOC122272191 Ptep1.0/2.0 NW_024971611.1 55278 65889 + uncharacterized LOC122272191 aug3.g15938 NA 0
LOC107441463 Ptep1.0/2.0 NW_024971650.1 886 8810 - putative phosphoenolpyruvate synthase aug3.g15937 LOC107441463 0
LOC122273908 Ptep1.0/2.0 NW_024983102.1 1881 2208 + uncharacterized LOC122273908 aug3.g15937 NA 2e-115
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02