Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107441723 Ptep1.0/2.0 NW_024969627.1 825144 831943 - uncharacterized LOC107441723 aug3.g16068 LOC107441723 0
LOC107441720 Ptep1.0/2.0 NW_024969627.1 932553 938500 - leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 aug3.g16067 LOC107441720 0
LOC107453013 Ptep1.0/2.0 NW_024969627.1 1009301 1010203 - AP-2 complex subunit sigma aug3.g21851,aug3.g16066 LOC107453013 0
LOC107441722 Ptep1.0/2.0 NW_024969627.1 1010322 1014650 + S-phase kinase-associated protein 1 aug3.g16065 LOC107441722 0
LOC107441718 Ptep1.0/2.0 NW_024969627.1 1016473 1064209 - isoleucine--tRNA ligase, cytoplasmic aug3.g16064,aug3.g22986,aug3.g17063 LOC107441718 0
LOC107447103 Ptep1.0/2.0 NW_024969668.1 579239 626123 - structural maintenance of chromosomes protein 5 aug3.g1606 LOC107447103 0
LOC107441724 Ptep1.0/2.0 NW_024969900.1 747993 811885 - bromodomain-containing protein 3 aug3.g16069 LOC107441724 0
LOC107441712 Ptep1.0/2.0 NW_024969913.1 455948 490128 + G-protein coupled receptor Mth2-like aug3.g16062,aug3.g20250 LOC107441712 0
LOC107441713 Ptep1.0/2.0 NW_024969913.1 460858 473576 + probable G-protein coupled receptor Mth-like 3 aug3.g16061 LOC107441713 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02