Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107441822 Ptep1.0/2.0 NW_024970037.1 210440 218790 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial aug3.g16168 LOC107441822 0
LOC107441823 Ptep1.0/2.0 NW_024970037.1 218765 232104 + small integral membrane protein 29 aug3.g16166 LOC107441823 0
LOC107441824 Ptep1.0/2.0 NW_024970037.1 234644 242340 - high mobility group protein HMG-I/HMG-Y aug3.g16166,aug3.g16167 LOC107441824 0
LOC107441820 Ptep1.0/2.0 NW_024970037.1 254980 279456 - uncharacterized LOC107441820 aug3.g16165,aug3.g23150 LOC107441820 0
LOC107441821 Ptep1.0/2.0 NW_024970037.1 284826 361411 - serine/threonine-protein kinase HSL1 aug3.g16163 LOC107441821 0
LOC107447153 Ptep1.0/2.0 NW_024970350.1 84941 101932 - ribonucleases P/MRP protein subunit POP1 aug3.g1616 LOC107447153 0
LOC107444865 Ptep1.0/2.0 NW_024970627.1 17900 34158 + adhesion G-protein coupled receptor D1 aug3.g16161,aug3.g23026 LOC107444865,LOC107441813 0
LOC107441816 Ptep1.0/2.0 NW_024970627.1 37763 58914 - carnitine O-palmitoyltransferase 2, mitochondrial aug3.g16160 LOC107441816 0
LOC107441825 Ptep1.0/2.0 NW_024971004.1 131437 165677 + uncharacterized LOC107441825 aug3.g15429,aug3.g16169 LOC107441825 7e-75
LOC122272187 Ptep1.0/2.0 NW_024971602.1 38779 57818 - uncharacterized LOC122272187 aug3.g16169 NA 5e-41
LOC122272945 Ptep1.0/2.0 NW_024973422.1 1253 8383 + phosphatase and actin regulator 1-like aug3.g16169 NA 6e-56
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02