Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122271784 Ptep1.0/2.0 NW_024969646.1 459838 467278 - uncharacterized LOC122271784 aug3.g16328 NA 7e-50
LOC107447180 Ptep1.0/2.0 NW_024969738.1 599279 704963 + protein Wnt-5b-like aug3.g1632 LOC107447180 0
LOC107454139 Ptep1.0/2.0 NW_024970162.1 11863 393453 + whirlin aug3.g6069,aug3.g6071,aug3.g16327 LOC107454139 0
LOC122270693 Ptep1.0/2.0 NW_024970320.1 829773 870777 + uncharacterized LOC122270693 aug3.g9818,aug3.g18193,aug3.g15566,aug3.g26714,aug3.g1097,aug3.g19330,aug3.g19261,aug3.g22403,aug3.g16329,aug3.g7403,aug3.g24358,aug3.g9152,aug3.g19188,aug3.g11063,aug3.g8790,aug3.g25600,aug3.g21923,aug3.g27165,aug3.g17253,aug3.g25298 NA 0
LOC107442053 Ptep1.0/2.0 NW_024970947.1 20335 48281 - cytochrome P450 3A6 aug3.g16322,aug3.g16323 LOC107442053 0
LOC122271575 Ptep1.0/2.0 NW_024970947.1 53682 55644 - uncharacterized LOC122271575 aug3.g16322 NA 3e-92
LOC107442058 Ptep1.0/2.0 NW_024970947.1 54735 120353 - uncharacterized LOC107442058 aug3.g16321,aug3.g16320,aug3.g21583 LOC107442058,LOC107442057 0
LOC107442059 Ptep1.0/2.0 NW_024970947.1 124103 151857 - cytochrome P450 3A8-like aug3.g16321 LOC107442059 0
LOC122271783 Ptep1.0/2.0 NW_024971141.1 3549 8019 - cathepsin S-like aug3.g16326 LOC107442061 0
LOC107442061 Ptep1.0/2.0 NW_024972074.1 288 5551 + cathepsin L-like aug3.g16326 LOC107442061 0
LOC107442060 Ptep1.0/2.0 NW_024972074.1 11905 20555 + procathepsin L aug3.g16325 LOC107442060 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02