Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122269002 Ptep1.0/2.0 NW_024969715.1 382 4433 + uncharacterized LOC122269002 aug3.g16653 NA 0
LOC122269000 Ptep1.0/2.0 NW_024969715.1 8112 17658 + origin recognition complex subunit 2-like aug3.g16653 LOC107442530 0
LOC107442529 Ptep1.0/2.0 NW_024969715.1 15757 46712 - nose resistant to fluoxetine protein 6 aug3.g16652 LOC107442529 0
LOC110282058 Ptep1.0/2.0 NW_024969715.1 64332 75939 + uncharacterized LOC110282058 aug3.g22324,aug3.g16651 LOC110282058 0
LOC107442528 Ptep1.0/2.0 NW_024969715.1 73692 81975 - DPH3 homolog aug3.g16650 LOC107442528 0
LOC107439698 Ptep1.0/2.0 NW_024970231.1 7823 304431 - uncharacterized LOC107439698 aug3.g9687,aug3.g16658,aug3.g9686,aug3.g16659,aug3.g16230 LOC107442540,LOC107452717,LOC107442542,LOC107442541,LOC107441890,LOC107439698 0
LOC107445185 Ptep1.0/2.0 NW_024970531.1 319983 321845 - uncharacterized LOC107445185 aug3.g19659,aug3.g16656,aug3.g13208 LOC107445185 0
LOC107442530 Ptep1.0/2.0 NW_024971051.1 1898 14211 - origin recognition complex subunit 2 aug3.g16653 LOC107442530 0
LOC107447243 Ptep1.0/2.0 NW_024971113.1 26073 47222 - UV excision repair protein RAD23 homolog B aug3.g1665 LOC107447243 0
LOC107440845 Ptep1.0/2.0 NW_024971981.1 712 12989 + neurogenic locus notch homolog protein 1 aug3.g16657,aug3.g23132,aug3.g14867 LOC107440845 0
LOC107442534 Ptep1.0/2.0 NW_024971981.1 40015 83209 + fibrillin-1-like aug3.g18223,aug3.g16654,aug3.g16655 LOC107442538,LOC107442534,LOC107442537 0
LOC122273770 Ptep1.0/2.0 NW_024980009.1 76 2176 - uncharacterized LOC122273770 aug3.g16654 NA 0
LOC122268521 Ptep1.0/2.0 NW_024998183.1 64 507 + uncharacterized LOC122268521 aug3.g16652 NA 2e-155
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02