Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107442647 Ptep1.0/2.0 NW_024969632.1 1529435 1540369 + uncharacterized LOC107442647 aug3.g16721 LOC107442647 0
LOC107442646 Ptep1.0/2.0 NW_024969632.1 1548731 1553724 - sex-determining region Y protein-like aug3.g24902,aug3.g16722 LOC107442646 0
LOC107442650 Ptep1.0/2.0 NW_024969632.1 1567458 1578910 - peptide methionine sulfoxide reductase MsrB aug3.g16724 LOC107442650 0
LOC122270812 Ptep1.0/2.0 NW_024969632.1 1579010 1584307 + uncharacterized LOC122270812 aug3.g16724 NA 0
LOC107442649 Ptep1.0/2.0 NW_024969632.1 1584810 1599855 - NKAP family protein CG6066 aug3.g16725 LOC107442649 0
LOC107454784 Ptep1.0/2.0 NW_024970214.1 48326 73435 - myosin-9-like aug3.g10821,aug3.g16727 LOC107454784 0
LOC107442653 Ptep1.0/2.0 NW_024970606.1 260632 270984 + fibulin-5-like aug3.g16726 LOC107442653 0
LOC107447242 Ptep1.0/2.0 NW_024970614.1 216156 263280 + protein big brother aug3.g1672 LOC107447242 0
LOC107456339 Ptep1.0/2.0 NW_024972068.1 18314 22664 - matrilin-3-like aug3.g16726 LOC107456339 0
LOC122273647 Ptep1.0/2.0 NW_024978118.1 55 3641 + myosin-9-like aug3.g16727 LOC107442652 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02