Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107442393 Ptep1.0/2.0 NW_024969642.1 72468 106374 + chorion peroxidase aug3.g27627,aug3.g16885 LOC107442393 0
LOC107447334 Ptep1.0/2.0 NW_024969674.1 31842 42010 + elongation factor 1-alpha aug3.g1688 LOC107447334 0
LOC107442854 Ptep1.0/2.0 NW_024970042.1 478604 486626 - sushi-repeat-containing protein SRPX-like aug3.g16880 LOC107442854 0
LOC107442889 Ptep1.0/2.0 NW_024970711.1 4351 6689 + uncharacterized LOC107442889 aug3.g16883 LOC107442889 0
LOC107442890 Ptep1.0/2.0 NW_024970711.1 28558 62418 - peroxidase-like aug3.g16885 LOC107442890 0
LOC122271509 Ptep1.0/2.0 NW_024970890.1 107824 120303 + nucleolar protein dao-5-like aug3.g16881 NA 0
LOC107442853 Ptep1.0/2.0 NW_024970890.1 122368 133429 + HIRA-interacting protein 3 aug3.g16881 LOC107442853 0
LOC107442852 Ptep1.0/2.0 NW_024970890.1 141783 191490 + fibrillin-1 aug3.g16880,aug3.g19106,aug3.g22501 LOC107442852 0
LOC122273058 Ptep1.0/2.0 NW_024973882.1 348 2327 - uncharacterized LOC122273058 aug3.g16881 NA 6e-88
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02