Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443147 Ptep1.0/2.0 NW_024969627.1 1146369 1222169 + calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type aug3.g17059,aug3.g24790 LOC107443147,LOC107445711 0
LOC107443154 Ptep1.0/2.0 NW_024969627.1 1226266 1239863 - probable 18S rRNA (guanine-N(7))-methyltransferase aug3.g17058 LOC107443154 0
LOC107443155 Ptep1.0/2.0 NW_024969627.1 1239996 1240904 + dnaJ-like protein MG200 aug3.g17057 LOC107443155 0
LOC107452632 Ptep1.0/2.0 NW_024969646.1 2019434 2028800 - fibroin heavy chain-like aug3.g1705 LOC107452632 0
LOC107447344 Ptep1.0/2.0 NW_024969674.1 1124806 1132131 + trophinin aug3.g1705,aug3.g273 LOC107447344 0
LOC122272248 Ptep1.0/2.0 NW_024971693.1 10866 26744 - uncharacterized LOC122272248 aug3.g15778,aug3.g17050 NA 6e-167
LOC122272249 Ptep1.0/2.0 NW_024971693.1 36474 37238 - uncharacterized LOC122272249 aug3.g17050 NA 3e-50
LOC107443156 Ptep1.0/2.0 NW_024971834.1 35725 47471 - uncharacterized LOC107443156 aug3.g17056 LOC107443156 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02