Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447380 Ptep1.0/2.0 NW_024969731.1 150124 174103 + histone acetyltransferase KAT6B aug3.g1713,aug3.g1714 LOC107447380 0
LOC107447392 Ptep1.0/2.0 NW_024969731.1 187276 199436 - MOB kinase activator-like 3 aug3.g1714 LOC107447392 0
LOC122269387 Ptep1.0/2.0 NW_024969805.1 793187 794944 - uncharacterized LOC122269387 aug3.g2249,aug3.g3436,aug3.g19998,aug3.g17146,aug3.g20089 NA 0
LOC107443275 Ptep1.0/2.0 NW_024969938.1 366840 429121 - glycine receptor subunit alpha-2 aug3.g17144 LOC107443275 0
LOC122270506 Ptep1.0/2.0 NW_024970215.1 12022 12864 + uncharacterized LOC122270506 aug3.g17146,aug3.g21039,aug3.g6964 NA 0
LOC107443263 Ptep1.0/2.0 NW_024970884.1 138862 163283 + lon protease homolog 2, peroxisomal aug3.g17140 LOC107443263 0
LOC107443264 Ptep1.0/2.0 NW_024970884.1 163257 171407 - UPF0711 protein C18orf21-like aug3.g17141 LOC107443264 0
LOC107443260 Ptep1.0/2.0 NW_024970884.1 172703 182373 + uncharacterized LOC107443260 aug3.g17142 LOC107443260 3e-75
LOC107443277 Ptep1.0/2.0 NW_024971020.1 18398 24728 + retinal homeobox protein Rx-like aug3.g17145 LOC107443277 0
LOC107443279 Ptep1.0/2.0 NW_024971567.1 23012 34371 - protein lin-12 aug3.g17147 LOC107443279 0
LOC107438375 Ptep1.0/2.0 NW_024971616.1 44318 56005 - neurogenic locus notch homolog protein 1-like aug3.g17147,aug3.g13029 LOC107438373,LOC107438375 0
LOC107443312 Ptep1.0/2.0 NW_024971824.1 2280 28526 - fatty-acid amide hydrolase 2-like aug3.g17149 LOC107443312 0
LOC122272337 Ptep1.0/2.0 NW_024971824.1 35988 48558 - uncharacterized LOC122272337 aug3.g17148 NA 0
LOC107443274 Ptep1.0/2.0 NW_024971895.1 17532 33637 + uncharacterized LOC107443274 aug3.g17143 LOC107443274 7e-157
LOC107440085 Ptep1.0/2.0 NW_024974592.1 2317 5691 + uncharacterized LOC107440085 aug3.g17143 LOC107440085 5e-44
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02