Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447372 Ptep1.0/2.0 NW_024969731.1 310769 317506 + uncharacterized LOC107447372 aug3.g1717 LOC107447372 0
LOC107443372 Ptep1.0/2.0 NW_024969803.1 3763944 3765871 - uncharacterized LOC107443372 aug3.g17179 LOC107443372 0
LOC107443374 Ptep1.0/2.0 NW_024969803.1 3876571 3917837 - LIM domain-containing protein jub aug3.g17177 LOC107443374 0
LOC107443357 Ptep1.0/2.0 NW_024969996.1 631244 657654 + amine oxidase [flavin-containing] aug3.g17170 LOC107443357 0
LOC107449749 Ptep1.0/2.0 NW_024969996.1 658203 702803 - protein sneaky-like aug3.g17171,aug3.g20910 LOC107449749 0
LOC107443364 Ptep1.0/2.0 NW_024970254.1 5297 27059 + uncharacterized LOC107443364 aug3.g17172 LOC107443364 0
LOC107443363 Ptep1.0/2.0 NW_024970254.1 38978 61543 - proliferation-associated protein 2G4 aug3.g17173 LOC107443363 0
LOC107443362 Ptep1.0/2.0 NW_024970254.1 61728 95572 + transcription factor CP2 aug3.g17174 LOC107443362 0
LOC107443360 Ptep1.0/2.0 NW_024970254.1 100595 138972 + cytochrome P450 4C1-like aug3.g17175 LOC107443360 0
LOC107447492 Ptep1.0/2.0 NW_024970254.1 207627 227146 + RYamide receptor-like aug3.g19793,aug3.g17176,aug3.g22036 LOC107447492 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02