Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443669 Ptep1.0/2.0 NW_024970447.1 148951 331626 - uncharacterized LOC107443669 aug3.g17385,aug3.g12608 LOC107443669 0
LOC107451258 Ptep1.0/2.0 NW_024970510.1 295137 333428 - ubiquitin carboxyl-terminal hydrolase 40 aug3.g3888,aug3.g17389 LOC107451258 0
LOC107443674 Ptep1.0/2.0 NW_024970524.1 10529 11201 + uncharacterized LOC107443674 aug3.g17387 LOC107443674 0
LOC122268379 Ptep1.0/2.0 NW_024970524.1 12847 13218 + uncharacterized LOC122268379 aug3.g17387 NA 0
LOC107443667 Ptep1.0/2.0 NW_024970586.1 96354 278415 + serine/threonine-protein kinase PLK1 aug3.g17383,aug3.g13747 LOC107443667 0
LOC107443668 Ptep1.0/2.0 NW_024970586.1 283151 376682 - metalloprotease TIKI2 aug3.g17382,aug3.g18676 LOC107443668 0
LOC110282593 Ptep1.0/2.0 NW_024971501.1 3732 4715 + jerky protein homolog-like aug3.g17389 LOC110282593 0
LOC122268417 Ptep1.0/2.0 NW_024971701.1 68 58762 - ubiquitin carboxyl-terminal hydrolase 40-like aug3.g17389 NA 0
LOC107443666 Ptep1.0/2.0 NW_024971875.1 39012 46150 - protein enabled homolog aug3.g17380 LOC107443666 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02