Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444244 Ptep1.0/2.0 NW_024969746.1 1408844 1417414 + uncharacterized LOC107444244 aug3.g17720 LOC107444244 0
LOC107444243 Ptep1.0/2.0 NW_024969746.1 1441744 1458264 - uncharacterized transmembrane protein DDB_G0289901-like aug3.g17721 LOC107444243 0
LOC107443793 Ptep1.0/2.0 NW_024969746.1 1483864 1519109 - uncharacterized protein DDB_G0271670-like aug3.g17722 LOC107443793 0
LOC107447464 Ptep1.0/2.0 NW_024969816.1 149789 154963 + HIG1 domain family member 1C aug3.g1772 LOC107447464 0
LOC107444254 Ptep1.0/2.0 NW_024970103.1 338398 370100 - beta,beta-carotene 9',10'-oxygenase aug3.g17724 LOC107444254 0
LOC107444253 Ptep1.0/2.0 NW_024970103.1 404502 414936 - transcription factor HES-1-A aug3.g17723 LOC107444253 0
LOC107436291 Ptep1.0/2.0 NW_024970168.1 8684 69891 + ABC transporter G family member 9-like aug3.g11440,aug3.g17725,aug3.g24397 LOC107444255,LOC107436291,LOC107443377 0
LOC107444265 Ptep1.0/2.0 NW_024971348.1 1552 13304 + noggin-2 aug3.g17729 LOC107444265 0
LOC107437902 Ptep1.0/2.0 NW_024971348.1 21334 47325 - A disintegrin and metalloproteinase with thrombospondin motifs adt-1-like aug3.g23077,aug3.g17728 LOC107437902 0
LOC107444261 Ptep1.0/2.0 NW_024971348.1 53965 81389 + polyhomeotic-like protein 1 aug3.g17727 LOC107444261 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02