Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444567 Ptep1.0/2.0 NW_024969900.1 253398 256243 - histidine-rich glycoprotein-like aug3.g17949 LOC107444567 1e-128
LOC107444529 Ptep1.0/2.0 NW_024969981.1 48937 54380 + leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3 aug3.g17940 LOC107444529 0
LOC107444528 Ptep1.0/2.0 NW_024969981.1 56274 69192 + slit homolog 2 protein aug3.g17941,aug3.g24624 LOC107444528,LOC107444735 0
LOC110283198 Ptep1.0/2.0 NW_024969981.1 74417 99382 + leucine-rich repeat neuronal protein 3 aug3.g17942 LOC110283198 0
LOC107444524 Ptep1.0/2.0 NW_024969981.1 99032 110689 - serine/threonine-protein phosphatase 2A activator-like aug3.g17943 LOC107444524 0
LOC107446835 Ptep1.0/2.0 NW_024969981.1 110913 122568 + serine-threonine kinase receptor-associated protein aug3.g19424,aug3.g17944 LOC107446835 0
LOC107444532 Ptep1.0/2.0 NW_024970841.1 148905 173500 + putative ferric-chelate reductase 1 aug3.g17948 LOC107444532 0
LOC107447525 Ptep1.0/2.0 NW_024971810.1 10146 31179 - metallophosphoesterase 1 aug3.g1794 LOC107447525 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02